Gene Information

Name : Ndas_5467 (Ndas_5467)
Accession : YP_003683352.1
Strain :
Genome accession: NC_014211
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 656157 - 658772 bp
Length : 2616 bp
Strand : -
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR017730:IPR001270:IPR018368:IPR003959:IPR 013093:IPR003593:IPR004176:IPR019489; KEGG: tfu:Tfu_0200 ATPase; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Cl

DNA sequence :
ATGAACTACAAGCTCACCAAGAAGAGCCAGGAGGCCCTGTCGGTGGCGATCCGCCGGGCCACCACGGACGGCAGTCCGCA
GACGGAGCCCGTGCACCTGCTGGCGGCCCTGCTGGACCAGGCGGAGGGCATCACCCGCCCGCTGCTCAAGGAGGTCGGGG
CCAACCCGGACGCGCTCCGGGACAAGGTCGAGGCGGCCGTCGGCGCGCTGCCCAAGGCGGCCGGTTCCACGGTCAGCTCG
CCCAGCTCCTCGCGCCAGCTGATCGTCTCCATCAACACCGCGGCCCAGCGCGCGCAGCAGATGGAGGACGAGTACGTCTC
CACCGAGCACCTGCTGGTGGGGCTGGCCGCGGACGGCGGCGAGGCGTCGAAGCTGCTCACCGAGGCCGGTGCCACCCCCG
ACGCGCTCCTGGAGGGGTTCGAGCGGGTGCGCGGCTCGGGGAAGGTGACCTCGGAGAACCCGGAGGACACCTACCAGGCC
CTGGAGAAGTACGGGGTGGACCTGACCGAGCGGGCCCGTGAGGGCAAGGTGGACCCGGTGATCGGCCGCGACGGCGAGAT
CCGGCGGGTCGTCCAGGTGCTCAGCCGCCGCACCAAGAACAACCCCGTGCTCATCGGTGAGCCGGGCGTGGGCAAGACCG
CGGTCGTGGAGGGCCTGGCCCAGCGGATCGTGGCCGGTGACGTGCCGCAGTCCCTGGTGGGCAAGCGCCTGGTGAGCCTG
GACCTGTCCGCGATGGTGGCGGGCGCCAAGTACCGGGGCGAGTTCGAGGAGCGGCTCAAGGCGGTGCTCTCGGAGATCAA
GGAGTCCGAGGGCCAGGTCATCACGTTCATCGACGAGCTGCACACGATGGTGGGCGCCGGCGCGGCCGAGGGCGCCATGG
ACGCGGGCAACATGCTCAAGCCCATGCTGGCGCGCGGTGAGCTGCGCATGGTGGGCGCGACCACCCTGGACGAGTACCGG
GAGAAGATCGAAAAGGACCCCGCGCTGGAGCGGCGCTTCCAGCAGGTCATGGTGGGCGAGCCCTCGGCCGCGGACACGAT
CGCGATCCTGCGCGGGCTCAAGGGCCGCTACGAGGCGCACCACAAGGTGCAGATCGCCGACTCGGCCCTGGTGGCCGCCG
CGACCCTGTCCGACCGCTACATCACGGCGCGGTTCCTGCCGGACAAGGCGATCGACCTCATCGACGAGGCGGCGTCCCGG
CTGCGCATGGAGATCGACTCCAGCCCGGTGGAGATCGACGAGCTCCAGCGCACCGTGGACCGCCTGAAGATGGAGGAGAT
GGCGCTCGACAAGGAGTCGGACCCGGCCAGCCGCCAGCGGCTGGAGCGGCTGCGCGCGGACCTGGCCGACCGCCAGGAGC
AGCTCAACGGGCTCGTGGCCCGCTGGGAGCAGGAGAAGGCCGGCCTCAACCGGGTCGGCGAGCTCAAGGGGCAGCTCGAC
GACCTGCGCACGCGGGCCGAGCTGGCCCAGCGCGAGGGCGACTTCGGCGAGGCCTCCCGGCTGATGTACGGGGACATCCC
GCAGCTGGAGAAGCAGGTCGAGGAGGCCAGCCGGGACGAGGAGAGGGCGGCCAGCCGGGGCGACGCCGCCATGGTCAAGG
AGGAGGTGGGCGCCGACGAGGTCGCCGACGTGGTGTCGGCGTGGACCGGCATCCCCGTGGGGCGTCTGATGGAGGGCGAG
ACCTCCAAGCTGCTGCGCATGGAGGACGAGCTGGGCAGGCGCCTCATCGGGCAGAAGGACGCCGTGGCCGCGGTGTCGGA
CGCGGTGCGGCGTGCGCGGGCGGGCATCTCCGACCCGGACCGGCCGACGGGGTCGTTCCTGTTCCTGGGCCCCACGGGCG
TGGGCAAGACCGAGCTGGCCAAGGCGCTGGCGGAGTTCCTCTTCGACGACGAGCGCGCGATCGTGCGGATCGACATGAGC
GAGTACTCCGAGAAGCACTCGGTGTCGCGGCTGGTGGGCGCGCCCCCCGGTTACGTGGGGTACGAGGAGGGCGGCCAGCT
GACCGAGGCCGTGCGCCGCCGCCCGTACACGGTGGTGCTGCTGGACGAGGTGGAGAAGGCGCACCTGGAGGTGTTCGACA
CCCTGCTCCAGGTGCTGGACGACGGCCGCCTGACCGACGGCCAGGGCCGTCAGGTGGACTTCCGCAACACCATCCTCATC
CTCACCTCCAACCTGGGGTCGCAGTTCCTGGTGGACCAGTCGCTGGAGGAGTCGGTGCGCCGCGACCGCGTGCTCGACGT
GGTGCGCGCGACGTTCAAGCCGGAGTTCCTCAACCGGCTGGACGACGTGATCATGTTCGACGCGCTGTCCACCGAGGACC
TGACGCGGATCGTGGACCTGCAGATCGACAAGCTGGCCCGGCGGCTGGCGGACCGGCGGCTGGGGCTGGAGGTGACGGAG
GGCGCCCGTGAGTGGCTGGCGCTGACCGGCTACGACCCCAACTACGGCGCGCGTCCGCTGCGCCGCCTGGTGCAGTCCTC
GATCGGCGACCCGCTGGCGCGCGAGCTGCTGTCGGGCGACCTGGCCGAGGGCGCCACCGTGGTGGTGGACGTGGACGAGG
GCGCGGACAGGCTCCGGGTGACCTCGCGCGGCGCCGAGGAGGCGCCGGTGGCCTGA

Protein sequence :
MNYKLTKKSQEALSVAIRRATTDGSPQTEPVHLLAALLDQAEGITRPLLKEVGANPDALRDKVEAAVGALPKAAGSTVSS
PSSSRQLIVSINTAAQRAQQMEDEYVSTEHLLVGLAADGGEASKLLTEAGATPDALLEGFERVRGSGKVTSENPEDTYQA
LEKYGVDLTERAREGKVDPVIGRDGEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPQSLVGKRLVSL
DLSAMVAGAKYRGEFEERLKAVLSEIKESEGQVITFIDELHTMVGAGAAEGAMDAGNMLKPMLARGELRMVGATTLDEYR
EKIEKDPALERRFQQVMVGEPSAADTIAILRGLKGRYEAHHKVQIADSALVAAATLSDRYITARFLPDKAIDLIDEAASR
LRMEIDSSPVEIDELQRTVDRLKMEEMALDKESDPASRQRLERLRADLADRQEQLNGLVARWEQEKAGLNRVGELKGQLD
DLRTRAELAQREGDFGEASRLMYGDIPQLEKQVEEASRDEERAASRGDAAMVKEEVGADEVADVVSAWTGIPVGRLMEGE
TSKLLRMEDELGRRLIGQKDAVAAVSDAVRRARAGISDPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDERAIVRIDMS
EYSEKHSVSRLVGAPPGYVGYEEGGQLTEAVRRRPYTVVLLDEVEKAHLEVFDTLLQVLDDGRLTDGQGRQVDFRNTILI
LTSNLGSQFLVDQSLEESVRRDRVLDVVRATFKPEFLNRLDDVIMFDALSTEDLTRIVDLQIDKLARRLADRRLGLEVTE
GAREWLALTGYDPNYGARPLRRLVQSSIGDPLARELLSGDLAEGATVVVDVDEGADRLRVTSRGAEEAPVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 6e-92 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ndas_5467 YP_003683352.1 ATP-dependent chaperone ClpB VFG2084 Protein 2e-93 43