|
Name : Snov_3891 (Snov_3891) Accession : YP_003695780.1 Strain : Starkeya novella DSM 506 Genome accession: NC_014217 Putative virulence/resistance : Unknown Product : D-lactate dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.2.4 Position : 4124012 - 4125508 bp Length : 1497 bp Strand : + Note : KEGG: azc:AZC_0083 glycolate oxidase subunit protein; PFAM: FAD linked oxidase DNA sequence : ATGGCCGGTCTCGTCATGCCGGAACCGAAGGCCGATATCCTGGCCCGCCGGGCGCAGATCATCGCCGATTTGCGCGCCAT CGTGCCGGGCGAGGGGGTCATCGACACCGAGACCGAGATGCGCCCCTTCGAGAGCGACGGGGTGACCGCCTATCGCCAGA TGCCGCTCACCGTGGTGCTGCCCTCGACCACCGAGCAGGTGTCGCAGGTGCTGGCCTATGCGCATGCGAACGGCATTCCC GTTGTGCCGCGCGGCGCGGGCACCTCGCTGTCGGGCGGGGCGCTGCCGCTCGCCGACGGCATCCTGCTCGGCATGGGCAA GTTCAACCGCATCCTGGACATCGACTTCGCCAACCGCACCGTGGTCGCCCAGCCCGGCGTGACCAATCTCGGCATCACCA CGGCGGTGGCGCATGAGGGCTTCTATTACGCCCCCGATCCCTCCTCGCAGATCGCCTGCACCATCGGCGGCAATGTCGGC GAGAATTCCGGCGGCGTGCACTGCCTGAAATACGGCCTGACCACCAACAACGTGCTCGGCGTCGAGATGGTGCTGATCAC CGGCGAGATCATCCGCATCGGCGGGCAGCATCTCGATTCCGGCGGGCTGGACCTGCTCGGCCTCATCGTCGGCTCGGAGG GACTGCTGGGCGTCGTCACCGAGGTGACGGTGCGCATCCTCAAGAAGCCCGAGACCGCCCGCGCCGTGCTGATGGGCTTC CCCTCCTCCGAGGCCGCCGGCGCCTGCGTCGCCGCCATCATCGCCGCCGGCATCATCCCCGGCGGCATGGAGATGATGGA CCGGATGATGATCCACGCCTCCGAGGCCTTCGTGAATGTCGGCTACCCGCTCGACGTCGAGGCGCTCCTGATCGTCGAGC TCGACGGGCCGGAGGCCGAGGTGAACCACCTCATCGAGCGCGTCGGCGAGATCGGCAACGGGCTCGGCTGCCTGACGCTG CGCGCCTCCACCAGCGAGGAGGAGCGCATCGCCTTCTGGGCCGGCCGCAAGGCCGCCTTCCCGGCGGTCGGGCGCATCTC GCCGGACTATCTCTGCATGGACGGCACCATCCCTCGCAAGGCGCTGCCGGAGGTGCTGAGCCGCATGGAGCAGATGTCGG AGAAGTACGGCCTGCGCTGCGGCAACGTCTTCCATGCCGGCGACGGCAATCTGCACCCGCTGATCTGCTACGACGCCAAC AAGCCGGGCGAGCTGGAGAAGGCCGAGGCCTTCGGCGCCGACATCCTGCTGCTTTGCGTCGAGGTCGGCGGCGTGCTGAC CGGCGAGCACGGCGTCGGCGTCGAGAAGCGCGACCTGATGGGGTCGATGTTCGACGAGACCGACCTCGCCCATCAGCAGC GGCTGAAATGCGCCTTCGATCCGAACTCCCTGCTCAACCCCGGCAAGGTGTTCCCGCAGCTCCACCGCTGCGCCGAACTG GGGCGCATGCATGTGTCGGGCGGCAAGCTGCCCTTCCCGGACATTCCGAGGTTCTGA Protein sequence : MAGLVMPEPKADILARRAQIIADLRAIVPGEGVIDTETEMRPFESDGVTAYRQMPLTVVLPSTTEQVSQVLAYAHANGIP VVPRGAGTSLSGGALPLADGILLGMGKFNRILDIDFANRTVVAQPGVTNLGITTAVAHEGFYYAPDPSSQIACTIGGNVG ENSGGVHCLKYGLTTNNVLGVEMVLITGEIIRIGGQHLDSGGLDLLGLIVGSEGLLGVVTEVTVRILKKPETARAVLMGF PSSEAAGACVAAIIAAGIIPGGMEMMDRMMIHASEAFVNVGYPLDVEALLIVELDGPEAEVNHLIERVGEIGNGLGCLTL RASTSEEERIAFWAGRKAAFPAVGRISPDYLCMDGTIPRKALPEVLSRMEQMSEKYGLRCGNVFHAGDGNLHPLICYDAN KPGELEKAEAFGADILLLCVEVGGVLTGEHGVGVEKRDLMGSMFDETDLAHQQRLKCAFDPNSLLNPGKVFPQLHRCAEL GRMHVSGGKLPFPDIPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 3e-120 | 57 |
