|
Name : Slip_1874 (Slip_1874) Accession : YP_003703193.1 Strain : Syntrophothermus lipocalidus DSM 12680 Genome accession: NC_014220 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3959 EC number : - Position : 1933596 - 1934429 bp Length : 834 bp Strand : - Note : COGs: COG3959 transketolase N-terminal subunit; InterPro IPR013838:IPR005474; KEGG: swo:Swol_0243 transketolase-like protein; PFAM: transketolase; SPTR: Q0B0B0 transketolase subunit A; PFAM: transketolase, thiamine diphosphate binding domain DNA sequence : ATGCGGGAAATTAGCCAACAAGCCGTGACAGAACTGAAAGAGCGGGCCAGGAGCCTGAGGTGCGAGGTGATTAAAATGCT GGGAAAAGCCGGCTCCGGGCACACGGGGGGCTCGCTTTCTGCAGCCGATGTCGTGGCTTGCCTCTATTTCTGGGAGATGA GGCTCGATAATGCCAACCCGGGTTGGCCAGAGCGGGACCGTTTTGTACTCAGTAAAGGACATGCCGCTCCTTTGCTGTAT GCGGCTCTGGCGGAAAAAGGTTTTATCCCCAAGGAAGAATTGCAAAGTCTTCGCCGCTTGGGCAGCCGGCTGCAGGGTCA TCCTGACATGCGAAAAGTTCCTGGGGTGGAAGCTTCGACCGGTTCCCTGGGCCAGGGAATAGCCTGGGCAGTGGGTATGG CCCTAGCAGGGCGTTTGGATGCCAAGGATTATCGAGTTTACACCCTGTTGGGAGACGGGGAGATACAAGAGGGAGAGGTG TGGGAAGCCGTGATGGCTGCCGCCCACTACCGGCTGGACAACCTAGTGGCTATTGTCGACTACAACGGGTTGCAGATTGA CGGGGCTGTAGATAAGGTAATGTCTCCCCTGCCTATTGCTGCCAAATTCGAAGCCTTCGGGTGGAACACGCAGGAGATTG ACGGTCACGATTTTCAGCAGATCATGCAGTCTTTGGAGGCAGCGCGGGGCCACAAGGGAAGACCTTCGGCTATCGTGGCC CGTACCGTTAAGGGCAAGGGAGTCTCATTTATGGAGAACGGGGTCGACTGGCACGGCAAGGCTCCCAATACGGAGCAGGT GGAAAGAGCCTTGGCCGAACTGGCAGTCAATTGA Protein sequence : MREISQQAVTELKERARSLRCEVIKMLGKAGSGHTGGSLSAADVVACLYFWEMRLDNANPGWPERDRFVLSKGHAAPLLY AALAEKGFIPKEELQSLRRLGSRLQGHPDMRKVPGVEASTGSLGQGIAWAVGMALAGRLDAKDYRVYTLLGDGEIQEGEV WEAVMAAAHYRLDNLVAIVDYNGLQIDGAVDKVMSPLPIAAKFEAFGWNTQEIDGHDFQQIMQSLEAARGHKGRPSAIVA RTVKGKGVSFMENGVDWHGKAPNTEQVERALAELAVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96117.1 | transketolase | Not tested | T-PAI | Protein | 2e-35 | 43 |
| unnamed | AAT96177.1 | transketolase | Not tested | T-PAI | Protein | 1e-35 | 43 |
| unnamed | AAT96100.1 | transketolase | Not tested | T-PAI | Protein | 6e-36 | 43 |
| unnamed | AAT96056.1 | transketolase | Not tested | T-PAI | Protein | 5e-36 | 43 |
| unnamed | AAT96229.1 | transketolase | Not tested | T-PAI | Protein | 3e-36 | 43 |
