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Name : Slip_0653 (Slip_0653) Accession : YP_003702001.1 Strain : Syntrophothermus lipocalidus DSM 12680 Genome accession: NC_014220 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : 3.1.26.4 Position : 676002 - 676469 bp Length : 468 bp Strand : + Note : COGs: COG0328 ribonuclease HI; InterPro IPR012337:IPR002156; KEGG: swo:Swol_2115 ribonuclease H; PFAM: ribonuclease H; PRIAM: ribonuclease H; SPTR: Q0AV47 ribonuclease H; PFAM: RNase H DNA sequence : ATGGTCAACCAGAAGAATAAGCGTACGGTTGTTATTTATACCGACGGCGCCTGTTCTGGGAACCCGGGCCCAGGCGGGTG GGGTGCGGTGTTACTTTACCAAGACCGGCACAAAGAGCTAAGAGGAGGGGACCCAGAGACGACCAACCAGCGGATGGAGT TGACCGCAGTTATAGAAGCTCTGAAGGCCTTAAAGGTCGAAGGCTGGGACGTAGAAGTTTATTCCGACAGCGCCTACCTG GTTAACGCCTTTAATCAGGGTTGGCTTGAAAAGTGGCAAAGAAACGGCTGGAAGAACGCGAAAAACGATCCGGTAGCCAA CCAGGATCTGTGGCAAGAGTTGCTTCGGTTGTCCAAGAAAAACAAGGTGAAGATTATCAAAATAGCCGGGCATTCAGGCG ACTTTTGGAACGAAAGGTGTGATGCCTTGGCGCGCCAAGCTATTAAAGAGATCAGTGGTCGGGATTGA Protein sequence : MVNQKNKRTVVIYTDGACSGNPGPGGWGAVLLYQDRHKELRGGDPETTNQRMELTAVIEALKALKVEGWDVEVYSDSAYL VNAFNQGWLEKWQRNGWKNAKNDPVANQDLWQELLRLSKKNKVKIIKIAGHSGDFWNERCDALARQAIKEISGRD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 3e-19 | 42 |
