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Name : secD (XNC1_0761) Accession : YP_003711054.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Unknown Product : preprotein translocase auxillary membrane protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 657747 - 659561 bp Length : 1815 bp Strand : + Note : - DNA sequence : ATGCTGATCGCTGCGATCCTCATCGGTTTGCTTTATGCACTTCCCAACCTGTATGGTGAGGATCCGGCTGTACAAATCAC TGGCGCGCGAGGCATCGGCGCCAGTGAAAAAACGCTGGACCAAGTCCGTAATGTTTTAGACAAAGATCAAATCAAGAGCA AGTCCATTGCGTTGGAAAATGGGGCAATCCTTGCTCGTTTCAATAGTTCTGATGTTCAGCTCCGTGCCCGTGAAGCACTG GTCTCTGCGTTGGGCGAACAGTATGTTGTGGCATTGAACCTGGCTCCTGCAACGCCTGCCTGGTTAAGCAAAGTCGGTGC TGAGCCGATGAAACTGGGGCTTGACCTGCGTGGCGGTGTTCACTTCTTAATGGAAGTGGATATGGAAACTGCACTGGGCA AATTACAGGAACAGAATATTGACAGCCTGCGTGTTGAGTTGCGTGATCAGGGCATTGCTTATTCTACTATCCGCAAGATT GATAATTATGGCGTTGAAGTTCGTTTCCGTGATAGCGATGCCCGTTCTAAAGCGGAAAACTATCTTGAACCTCGTCACCG TGACTTAGTCTTCTCTGCCGGTGCCAATAATACACTGAAAGCCGTGATGAGTGATGAGCGTCTGCGTGAAGCGCGTTCTT ATGCTGTTCAGCAGAATATTACCATCCTGCGTAACCGTGTTAACCAACTTGGGGTTGCTGAGCCACTGGTTCAACGTCAA GGCGCAGACCGTATTGTTGTTGAATTACCCGGTATTCAGGATACCGCCCGCGCTAAAGAGATCCTCGGCGCAACGGCAAC CTTGGAATTCCGTCTGGTGAATACCAATATTGACCAAAATGCGGCACTTGCTGGTCGTATTCCCGCTGATTCAGAACTGC AATATACCCGTGATGGTAACCCAGCCGTATTGTATAAGCGTGTTATCCTGACCGGAGATCATATTACTGATTCCACTTCC AGTACGGATGAGAACGGTTATCCGCAGGTGAATATTTCTCTGGATAGCGCGGGTGGTACAGCGATGTCTAATTTCACCAA AGACAATCTGCAAAAACCAATGGCAACGCTGTTTGTGGAATATAAGGACAGCGGCAAAAAAGATGCCAATGGTCGTTCGC TTTTGGTTAAGAAAGAAGAAGTCATCAATATCGCAACTATTCAGTCGCGTTTAGGTAATAATTTCCGTATTACGGGTATT AGTAACCCTGCTGAAGCCCGCCAGTTATCACTGTTGCTACGTGCTGGTGCGTTAATTGCGCCAATCCAGATTGTGGAAGA ACGTACTATAGGGCCAACGCTGGGTTTGCAAAATATCGAGCAAGGTCTTGAAGCGTGCTTGTGGGGCTTGGTTGCTTCCA TTTTGTTTATGGTAATTTACTATCGCAAATTTGGCCTGATTGCGAGCAGTGCATTGCTGGCAAACTTAGTCCTCATCGTC GGTATTATGTCTCTGTTGCCGGGTGCGACGCTGACTATGCCGGGAATTGCGGGTATTGTTCTGACACTTGCCGTCGCCGT GGATGCGAATGTGTTAATCAACGAACGCATCAAAGAAGAATTGCGCAATGGACGTACCATTCAGCAGGCAATTCATGAAG GCTACAAAGGTGCATTCTCCAGTATCATTGACGCAAACCTGACTACGCTGATTACTGCTATCATTTTGTATGCCGTGGGT ACTGGCTCTATCAAGGGCTTTGCGATCACGACAAGTATTGGTGTGGCGACTTCGATGTTCACCGCGATTGTGGGAACGCG AGCAATCGTGAACTTGCTGTACGGTGGCAAGCGTATCAATAAGTTGTCAATTTAA Protein sequence : MLIAAILIGLLYALPNLYGEDPAVQITGARGIGASEKTLDQVRNVLDKDQIKSKSIALENGAILARFNSSDVQLRAREAL VSALGEQYVVALNLAPATPAWLSKVGAEPMKLGLDLRGGVHFLMEVDMETALGKLQEQNIDSLRVELRDQGIAYSTIRKI DNYGVEVRFRDSDARSKAENYLEPRHRDLVFSAGANNTLKAVMSDERLREARSYAVQQNITILRNRVNQLGVAEPLVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNIDQNAALAGRIPADSELQYTRDGNPAVLYKRVILTGDHITDSTS STDENGYPQVNISLDSAGGTAMSNFTKDNLQKPMATLFVEYKDSGKKDANGRSLLVKKEEVINIATIQSRLGNNFRITGI SNPAEARQLSLLLRAGALIAPIQIVEERTIGPTLGLQNIEQGLEACLWGLVASILFMVIYYRKFGLIASSALLANLVLIV GIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELRNGRTIQQAIHEGYKGAFSSIIDANLTTLITAIILYAVG TGSIKGFAITTSIGVATSMFTAIVGTRAIVNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-115 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-116 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-115 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-115 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-115 | 48 |
