|
Name : XNC1_1376 (XNC1_1376) Accession : YP_003711639.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Virulence Product : ABC transporter RTX toxin Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : 3.6.3.43 Position : 1234148 - 1236277 bp Length : 2130 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 9927695; Product type e : enzyme DNA sequence : ATGACTGACAATTTTTCCTTTACGAGTGATGAAGAGCTCTCTTTGGAAAACTATGCCCTGGATTGTATTGCCTATTTAGG CAAACAATTTCACAAAGTCGCTTCTGTCGAACAACTTCAGCACACTCTGGGGCTGGATTCCCTTGTGCTGACAGATCCGC AACTGCGTGAAGCCGCTGATGCCCTTGAGTTGCACAGTAAATTAGATAGATTAACCGCGAAAACGGCGGCGACAGTGCAT TTACCGGCGTTAATTGAATTGGATCAACGCTGGTGGGTATTGTCAGATGTCCATCCTGACAGATTGACTGTATTTGATCC CACAACCGGAAAACACGAAACCCATCACCTACCGGGCGAATATGAATATAAAATACTGCTGGTGGTAGATAAATCACTGA CCAGACAACAGGTTAAATTTGGCCTGAGCTGGTTTTATCCTTCCATTCTCAGACAGAAAAGCCAGTTGCGGGATATTTTC CTGTTTGCCATTGTGTTGCAGCTTTTCGCACTGGCAGCACCTTTGTTGTTTGAAAATGTGATTGATAAAGTGCTGGTAGG ACGGAGTATCTCCAGCTTACATGTCATCGGCATGGCAATGCTGGCATTGGCTCTGGCAGAGCCTTTATATAGTTTTCTGC GCAATACTGTGTTCGGGCATATGGCCAGCCAAATCAACTCTGAACTTTCAGGCAGACTTTATCGCCATTTAGTGGGATTA CCTCTGCCCTATTTTAAGCAACGCCAAACAGGGCAAATTATTGCCAGAGTCAGAGAAATGGCGCATATCCGCCAATTTTT GACCGGTTCTACCTTGATGCTGTTGCTTGACCTGATTTTCATCATTCTGTTTCTGGGCGTCATGTTTCATTATTCCTCCC TGCTGACATGGATTGTGATAAGTTCGCTGGTACTCTATTTCTTGCTGTGGATCACCGTTGGGCCAATCATTCGGCGCAAA GTAGAAAAAGAGTATGAATCGGATGCCGATGCCACCAGTTTCCTGACAGAAGCTGTCACGGGTATTGAAACCATCAAAAC CACGGCAACGGAAAAACGTTTTTTGTATCAATGGCAAAGGGTATTGAGCCAACAGTTAATCCAACGTTTTACCACCCAGA AAAGCGGGCTGGCTGCCGGACAAGGGATCGCACTGATCCAGAAAGTTATCGCGGCATTGCTTCTGTGGTGGGGAGTCCGA AGTGTTCTCAATGGGGATTTGTCTCCGGGTGAATTGATTGCCTTCAATATGCTGGCAGGACACGTTACTCAGCCGATCCT GAGATTGGCCCAAGTCTGGCAAGATTTTCAGCATACACTGATCGCCTTGCGACGGGTTGGCGATATTCTTGATGAACCGA TGGAACACAGTAAACAGGGGCTGGCATCAGCGCCCGAGCTGGCCGGTCAGATTGAATTCAACAATATTCGCTTCCGCTAT CATGCAGATACGCCTGAAGTGCTGGCAAACCTGTCATTAAGCATTAAGGCAGGAGAGTTTATCGGTATCACTGGGCCATC AGGTTCAGGAAAAAGTACACTGACCCGATTATTACAGCGCCTGTATGTGCCACAACATGGTCAGGTTCTGGTGGATGGCA TGGATTTGGCGATTGCTGATCCCGTTGCACTGCGGCGAAATATGAGTGTCGTTTTGCAGGAGAGCATTCTGTTTTCCGGC AGCATTGCGGATAATATCCGCCTGTGTAAACCCAATGCCAGTGATGAAGAAGTCTATCGGGCCGCAGCCTTAGCGGGAGC AACTGACTTCATCGACGCCTTTCCCCATAAATTCGCCCATCCTGTCGGCGAAAAAGGCAATAATCTTTCCGGCGGACAGC GCCAACGCATTGCACTGGCAAGGGCATTGCTAAATGATCCCAAAATTCTGATCCTCGATGAAGCGACTTCCGCACTGGAT TATGAATCTGAGGCCGCCATAATGAGCAATATGGATGAAATATGCCGCAACCGGACGGTGATTAGCATCGCCCATCGGCT GAATACTCTGCGCTACGCTAACAAAATTTTTGTTTTGGATCAGGGAAAAGTCGTTGGGGCTGATTCACACGATGCCCTTG TGCAACAAGGGGGTTTATATGCCCAACTTTGGGAGCAGCAAACAAAGTGA Protein sequence : MTDNFSFTSDEELSLENYALDCIAYLGKQFHKVASVEQLQHTLGLDSLVLTDPQLREAADALELHSKLDRLTAKTAATVH LPALIELDQRWWVLSDVHPDRLTVFDPTTGKHETHHLPGEYEYKILLVVDKSLTRQQVKFGLSWFYPSILRQKSQLRDIF LFAIVLQLFALAAPLLFENVIDKVLVGRSISSLHVIGMAMLALALAEPLYSFLRNTVFGHMASQINSELSGRLYRHLVGL PLPYFKQRQTGQIIARVREMAHIRQFLTGSTLMLLLDLIFIILFLGVMFHYSSLLTWIVISSLVLYFLLWITVGPIIRRK VEKEYESDADATSFLTEAVTGIETIKTTATEKRFLYQWQRVLSQQLIQRFTTQKSGLAAGQGIALIQKVIAALLLWWGVR SVLNGDLSPGELIAFNMLAGHVTQPILRLAQVWQDFQHTLIALRRVGDILDEPMEHSKQGLASAPELAGQIEFNNIRFRY HADTPEVLANLSLSIKAGEFIGITGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVALRRNMSVVLQESILFSG SIADNIRLCKPNASDEEVYRAAALAGATDFIDAFPHKFAHPVGEKGNNLSGGQRQRIALARALLNDPKILILDEATSALD YESEAAIMSNMDEICRNRTVISIAHRLNTLRYANKIFVLDQGKVVGADSHDALVQQGGLYAQLWEQQTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 5e-122 | 45 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 3e-122 | 45 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 3e-122 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XNC1_1376 | YP_003711639.1 | ABC transporter RTX toxin | VFG0907 | Protein | 2e-122 | 45 |
| XNC1_1376 | YP_003711639.1 | ABC transporter RTX toxin | VFG1557 | Protein | 1e-122 | 45 |
| XNC1_1376 | YP_003711639.1 | ABC transporter RTX toxin | VFG1501 | Protein | 1e-122 | 45 |
| XNC1_1376 | YP_003711639.1 | ABC transporter RTX toxin | VFG0841 | Protein | 4e-115 | 45 |
| XNC1_1376 | YP_003711639.1 | ABC transporter RTX toxin | VFG1269 | Protein | 1e-121 | 43 |
