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Name : XNC1_1378 (XNC1_1378) Accession : YP_003711641.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Virulence Product : RTX toxin ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : 3.6.3.43 Position : 1237700 - 1239757 bp Length : 2058 bp Strand : - Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 9927695; Product type e : enzyme DNA sequence : ATGATAGCTAATAGAAATCAAGCCCCTACCCTTAATGAAAACTTAAGTAACAGTGATGATTATATTTCTGCCCTAAACAA GCTGAAAAAAGAATACAATATTAATATCAGAATTAAACACTCTATAAATAAGAAGTTAGGTTCTATATCCTTACCGGCCA TTTTATTTAATCATGATGGAGAACCTTTCATTCTGGCAAAATATGATGAACAACGCGTATTAATTCAAAAACCTTATCAG GAAACACCTGAGATAATAGATAAAGCAGAATTTATCAATCTATGGAGCGGGCGCTGGATAAAAATTAAACAAAAAAACAG CCAATTTAATATTCGCTGGTTTATTCCTGAGTTTGTCAGCCAAAAAAAGAACCTCACGGAGATACTGCTGTTTTCTTTCA TTCTCCAGATATTGGCGCTGATTTCTCCTCTGGTCGTACAGGTTGTCATGGACAAGGTTCTCGTCCATCAAGCACTTTCA ACATTGGATGTCCTGATTTTCGGACTCGTGATTGCCGGTTTGATTGAGGTACTCCTGCGAGGACTACGCGAATATCAGTA TGCCCACACGGCCAATCGGATTGACATAAAACTCGGATTGAAGCTGGTACAACATTTGTTCGGCCTGCCGTTGCTGTATT TTAAATCCCGACAGGTGGGCGCAATTGTCACGCGGGTCAGAGAGCTGGAAACTATCCGGGAATTCCTGACTGGCTCTATG TTCACACTGAGTATCGATGTGCTGTTCATGTTTGTCTTCATTTACGTCATGAGCCTGCTCTCCGGTACGCTTACCCTGAT TTTTCTGCTTACCATTCCATTTTATGCCCTGCTGGCCTGGTGGGTTACGCCGAAAATTGAAAAAGCAGTGGAAAAACAAT TTACACATTCAGCAATCAATACCTCTTTTCTGACCGAAACGATAGCAGGCGCTGAAACGCTGAAAAGTCTTGCAGCTGAA CCCCGCTTTATCCGACGCTGGGATGACCAGACCGAAAAGATGGTCAGTACCAGCTATGATGTACAGCAGTGGGATAATCG TGCCAGCCACCTGGTCATGATGTTACAGAAAGTCACCAGTGCCGTGATTATCTGGCTTGGTGCTTCAGAAGTACTTTCCC TGCATATGACCATCGGTCAATTGATTGCGTTCAATATGATGGTCAGCCATACCCAACAACCACTGGCTAAGCTGGTGCAG CTCTGGGGGCAATTTATCCGTTCGCGCATCGCCATTGATAAATTGGGGGATATGCTGAATCTGCCGACAGAGCAACAATC AGGCAAAGAGCATGTTACGTTGCAGGGAGCCATTTTATTTTCCAATATTGTTTTCCGTTATCAGCCCGATTTATCCCCCA CCATCAACCAGTTCTCGCTGGATATTCGTGCAGGCGAAACCATCGGCATCGTCGGAACCTCGGGTTCAGGGAAAAGTACG CTGGCCCGTTTGCTGCTGCGGCTTTATACCCCGGAAAAAGGCACCATTATGCTGGATGGCATCCCATTGCAACAGCTTAA TATTGAATCTATCAGGCAACAGATCGGTATCGTGCTGCAAGAAAACTTCCTGTTCAATAAAACTGTCTATGAGAATTTGT CTCAATCATTCCCTGATGCTCCGTTATCAGCCGTGATTGAAGCTGCGAAGCTGGCAGGAGCCCACGATTTTATTCTCAAG ATGCCGATGGGTTATGACACGGTGATTGCAGAAGGCGGGCAATCTTTATCAGGCGGTCAGCGGCAACGTCTGGCCATCGC CAGAACGCTGCTGTCTGATCCCAAGATTCTGATCCTTGATGAAGCCACCAGCGCACTGGATGACGAATCACAAGCCATTA TCCAATCCAATATGGCAGATATTTCGCAAGGCCGGACGGTTATTACCATAGCTCATCGGCTCTCCACAGTACGTCAATGT GACCGGATTATTGTATTGCACCAGGGTCAAATCATTGAGCAAGGCAGCCATGACCAGTTGTTACAACAAGGTAAACACTA CCGAAAACTTTGGCAGCTACAACAAGAGCTAAAACAGGAGAAACCTTCCTATGCTTAA Protein sequence : MIANRNQAPTLNENLSNSDDYISALNKLKKEYNINIRIKHSINKKLGSISLPAILFNHDGEPFILAKYDEQRVLIQKPYQ ETPEIIDKAEFINLWSGRWIKIKQKNSQFNIRWFIPEFVSQKKNLTEILLFSFILQILALISPLVVQVVMDKVLVHQALS TLDVLIFGLVIAGLIEVLLRGLREYQYAHTANRIDIKLGLKLVQHLFGLPLLYFKSRQVGAIVTRVRELETIREFLTGSM FTLSIDVLFMFVFIYVMSLLSGTLTLIFLLTIPFYALLAWWVTPKIEKAVEKQFTHSAINTSFLTETIAGAETLKSLAAE PRFIRRWDDQTEKMVSTSYDVQQWDNRASHLVMMLQKVTSAVIIWLGASEVLSLHMTIGQLIAFNMMVSHTQQPLAKLVQ LWGQFIRSRIAIDKLGDMLNLPTEQQSGKEHVTLQGAILFSNIVFRYQPDLSPTINQFSLDIRAGETIGIVGTSGSGKST LARLLLRLYTPEKGTIMLDGIPLQQLNIESIRQQIGIVLQENFLFNKTVYENLSQSFPDAPLSAVIEAAKLAGAHDFILK MPMGYDTVIAEGGQSLSGGQRQRLAIARTLLSDPKILILDEATSALDDESQAIIQSNMADISQGRTVITIAHRLSTVRQC DRIIVLHQGQIIEQGSHDQLLQQGKHYRKLWQLQQELKQEKPSYA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 6e-113 | 45 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 6e-113 | 45 |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 7e-113 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| XNC1_1378 | YP_003711641.1 | RTX toxin ABC transporter | VFG1269 | Protein | 3e-123 | 45 |
| XNC1_1378 | YP_003711641.1 | RTX toxin ABC transporter | VFG1557 | Protein | 4e-113 | 45 |
| XNC1_1378 | YP_003711641.1 | RTX toxin ABC transporter | VFG1501 | Protein | 4e-113 | 45 |
| XNC1_1378 | YP_003711641.1 | RTX toxin ABC transporter | VFG0907 | Protein | 3e-113 | 45 |
| XNC1_1378 | YP_003711641.1 | RTX toxin ABC transporter | VFG0841 | Protein | 4e-107 | 44 |
