|
Name : XNC1_3569 (XNC1_3569) Accession : YP_003713709.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Unknown Product : Rhs family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 3447150 - 3451580 bp Length : 4431 bp Strand : - Note : Evidence 3 : Function proposed based on presence of conserved amino acid motif, structural feature or limited homology DNA sequence : ATGGGATTAGGTGATGAAATTATTACCCGGATTGCCCGGGTCGGGGCCACCCATGCCCGGCCGCCATTGCCGCCTGCGGG CGGTGCCAGAGGGCCGGCAGCCGCACGCAAAGGCGACCCCATCCAGCACAAGAGCTTCTTTGGTGCCCTGATGGGGGCAG TGGCCGGTGCCCTGATTGGAGCGGCGATTTTCGGGGCGGTGGGGTTGCTGGTTGCCGGTACCGGCGGATTGGGGGCTACC CTTATTGTAGCTGCCGCCGGCAGCGGGTTAACCTATCTGGCCAGCGATGCCATCGCGGCGGCCAGTTCTGCTGTCACGAA CTTCGTTGACAGCTTCGGCTCGCCGGACGGGATGCTGGACAGTGGCTCCGGTAACGTCATGATTGAAGGAAAACCGGCCG CGCGTGCGACGGCAGACATAGCCAGGTGCAGCAAACACCCTGCGCCACCGTTGATAGCGCAGGGCAGTGAGTCGGTGTTT ATCAACGGCCAGCCGGCGGCGCGGGTCGGCGACAAGCTGGTGTGTGGTGCCGCCATCAAAGGGGGCGCCAGCAAGGTCTT TATCGGCTCCGGTCAGGGAACTTACCTGGAAATTGAAGAAGAATTCTCCGGCTGGCAGCGGGCGTTACTGGTGGCGGTGG AATTTCTGGTGCCGCCGACACGCGGGCTGATAAAAGGCGTCGGCAAACTGATGACGAAAACCGGCCGGCAGGCGGTCTTG ACCGGGGCGAAGCTGGGTGCCAGAAAAGCTGTTCATGCCCTGAAGGGCAGAGTGATGTGTGCCAGCACCGCCTTTAAAGC CAATAAAGGCGTCAAACGTTTTACTCAGGCCACCAAAAAATTCTTTACGGGCGACCCGATAGACGTGACCACCGGCAGCT TGTTTGACCAGCGCACCGAGCTTGAACTGGGACAAACGATACCGCTGACCTTCACCCGCAGCTGGTCACCGGGGTTGCGG GGACTGCTCGGCGAAAACTGGCTGGACAGCTTCTCCGAAGCCGTCATCGTCACCGGCGACCGGATAGAAGTTCTGACGCT GGAAGGCGCCTCCCTGCACTTCGCCCTGCCCCAAAGCGTAGACCACAGTATCAACCCGGAGCACCCGGAATTTACGCTGA GCCGGCAACAACAGGGCTTCGTATTAACCGAGCGTAATCAGCCGGTCAGAAAATACTTTACCCGGCCGGGCATTTCAGCA ACTCCCGGCACACAACGCTGGCAACTGGCTGCTCTGCGTGACTGCAACGGTAACACCATTGAGTTTCATTATGACAAACA GTATCAGCTAAACCGAGTCACTCACAGCGACGGTCCTGAGCTGGTCTTGCAGTACCGTGAAGACGGTTTGCTGGCCGACA TCCGTCGTGTCGACAGCGGACTCAATGAGGTGCTGGTGCGCTATGACTATCACGACAATGGCTGGCTGGCAGAAGCGGAC AGTACCCGGTATTTTCACCTGTTCTATGAATACAATGCACAGGGATTGATTAGCCGCTGGTCAGACGGTGACCAGACGGC GGTGGATTATGTGTATGATACCGAGGGTCGCTGCATTGAAAGTGTCGGCAGTGGCGGCTATTACCCCGTCCGGCTGACCT ATGAACCCGGCATCACCCGCTCCACCACCCCGCAGGGCCATACCACCACCTGGCATTACAATGAGCAGCAGCAGGTCACG CAGGTGGAAACCCCGTGCGGACATATTACCCGGTATGAGTACGATGACTGGGGTAACCTGCGGCAGCAGATATTGCCGGA AGGGCAGGTCTTACAGCTGGATTATCTGGCGGATACAGGACTGGTCACGGCATTTACCGATGCCGGCGGTGCTGTATGGC AGTATCACTACGATGAGGATGACCGACTGGCCAGCATGACTGACCCGCTGGGGCGGGTCTGGTGGCAGCAATACGATGAT AAGGGTCATGCCGGGTGCTTTATTGCCCCTGACGGCAGCAAAACCACCCTGACCCGCAATGCATTCGGGCTGGTGACGAA GGCCGAAGATGAAGAAGGCAACCAGCGACGCTGGGAATACGATGACCATCAGCGGCTGACCCGGCTGTTTGATGAGGAAA ATCGCAGCCTGCGGCTGGGTTACGACAGCCATGACCGGTTGCAGCGGCTGTCATCGGGCGGCGGGGCCTTATGGTCGTGG GAATATGACCGCCATCACCGCATCGCCTTAAGTGACCGCCCCAACAACAGTCTGGAGCGCTTCCGCCATGACCGCCACGG CAATCTGACCCGATGGACAGATGCCCGGGGCGTGGAATGGCAGATTGAATACGGGCCGTTTGACCTGCCGGTCGGCCGCC TTGACGGTGAAGGTCACCGCTGGCAGTACCGCTATGACCCTGACAGCCTGCAACTGCTGGAAGTCATTAACCCGCAGGGG GAAAGCTACCGTTATCAGCTGGATGCCGACGGGCGGGTGACCACGGAGACCGACTACGCCGGTACACAGTGGCATTATGC CTATGACGGCAATGGCAACTGCATTGAAAAGCGGGATGCACTGAATCAGGTCACCCGCTATGACTATGATGCCGCCGGGC AGATGACCGCGATGCACACGTCGGAAGGCCGCACCACTTACGCCTACGATATCCTGGGGCGCTTACTTGAAGTGACCGCG CCGGAGGCTGAACCGCTGACCTTTGAATACGATGATAAAGACCGCCTTATCCGCGAAACCCAGGCATACGGCAATATCAC CCGCGATTACCCGGACAATACGCAGGTAACGCGCACCCTGCTCATGCCGGATGGCGGCCAGTGGACCACCGCCACGCAGG CAAACAAAACAGGCGAACTGAGTCTGCTCAACATCCATGGCGGGCACCGGCTCTCGTTTGAACGGAACGAAGACGGACAC GAATGCTACCGCCAGTCGGACAAAGGCTTTATTCTGCGTCAGGAACATACTCTGATGGGGCAACTGAGCTGGCAGCGTGC AGGCCGCAATACCCGCCCGGAGTTCTTCGCCGCCGATGACCTGGCAGACATCCCACAACCGACGCTCTCGGGTTTAGACC GGGAATATCGTTACGATGCAGCATTGAATCTGGTGGCCGCCAATGATGAACGGCAGTGGCTGCGTTATGTGGTCAACGGC AACGGTCAGGTCACATCAGTCAGTGACGGCGACCGGCTGCGGGAGCATTATCAGTATGATGCCTGCGGTTACCCCGCCCG CCGTTTTGACGGCCGGCACGACATTGACAACGAGCGGCTCTACCAGAAGGGACACCGGCTGCGGCAGGCAGGGCAGCATC TATTCGAATACGATGAGGCAGGCCGGATGACCGCCATGCAGTTGTGGCAGGAAGGCCATCGCCCACAACTGACTAAATAC CGCTGGAACAGCCAGAATCAGCTGACCGGCGTGCTGACACCGGGTGGCCAGCAGTGGGAATACCGCTACGATGCCTTCGG GCGGCGCATCGAAAAAGCGTGTCAACAGGCGGGAAGCTGCACCACGTATCTTTGGGACGGCGACCAGCCAGCGGAAATCC GCGAATACCGCCATCATCGGCTGTACAGCATCCGGCATTTAGTTTTTGACGGCTGGCAGCTGCTGGCGCAACAAGTGCAG TTCTTCACACCCAACCCGGAAAATCGCAGTGAACTGATTGCCGGTGAGGTGCAGACGCAGTATGCGGTGTGCGCCCCGAC AGGAGAACCGCTGGCATTGTTTGATCCGCAAGGCCACCGTGTCTGGCGTCAGCCACAACAGAGCCTGTACGGGATGCAAT TGAAAGCCGCAGGCGAAAATGCTGAACTGAATCCGGAAATGCAGTTTGCAGGACAGTGGCTCGATGCAGAGAGCGGTTTA GTCTATAATCGGTTCAGATATTTCTCGCCAGAGGCGAGTGTATACCTGACACCGGATCCACTGGGGCTGCTGGGGGGAAC CAATCCCTATTCCTATGTCCATAATCCGACAGGTTGGATTGATCCGCTGGGGTTGGTAGGGTGTTCGACCAAGTTGGGTA AAAACATGATGGAAAATATGGGCTTATCGCGTTCTGCTAAATGGAGTGGCTATCAGGCTCACCATGTTATACCAAAAGAA TTAGCAAACCATCCAGCGTTGAAAAAAATTAATTATGATATTGATGTTGCTGCCAACGGAATATTTTTGAGAAAAGCTGA TAATGGCGTCAGTGCAATGGCAAGGCATCAAGGTAACCACCATGGATACACAGATGCAGTGAGAAACGCTTTAGATAGAA TAGACCTTAAACAATCCAAAGAGGCTATATCCAAGCAAGTAGCCAACATACAAGATATAGCTAAAAAAGGAATGATGGAT GGGAATATAATTAGATCTAAGGATATGTACAACACGAAAATATTTGGTAAAGATGTTAACCAAATAGGAAGGCAAAGAGT GTTTGAGCGTTGGAGTAAAATATTAGGGTGA Protein sequence : MGLGDEIITRIARVGATHARPPLPPAGGARGPAAARKGDPIQHKSFFGALMGAVAGALIGAAIFGAVGLLVAGTGGLGAT LIVAAAGSGLTYLASDAIAAASSAVTNFVDSFGSPDGMLDSGSGNVMIEGKPAARATADIARCSKHPAPPLIAQGSESVF INGQPAARVGDKLVCGAAIKGGASKVFIGSGQGTYLEIEEEFSGWQRALLVAVEFLVPPTRGLIKGVGKLMTKTGRQAVL TGAKLGARKAVHALKGRVMCASTAFKANKGVKRFTQATKKFFTGDPIDVTTGSLFDQRTELELGQTIPLTFTRSWSPGLR GLLGENWLDSFSEAVIVTGDRIEVLTLEGASLHFALPQSVDHSINPEHPEFTLSRQQQGFVLTERNQPVRKYFTRPGISA TPGTQRWQLAALRDCNGNTIEFHYDKQYQLNRVTHSDGPELVLQYREDGLLADIRRVDSGLNEVLVRYDYHDNGWLAEAD STRYFHLFYEYNAQGLISRWSDGDQTAVDYVYDTEGRCIESVGSGGYYPVRLTYEPGITRSTTPQGHTTTWHYNEQQQVT QVETPCGHITRYEYDDWGNLRQQILPEGQVLQLDYLADTGLVTAFTDAGGAVWQYHYDEDDRLASMTDPLGRVWWQQYDD KGHAGCFIAPDGSKTTLTRNAFGLVTKAEDEEGNQRRWEYDDHQRLTRLFDEENRSLRLGYDSHDRLQRLSSGGGALWSW EYDRHHRIALSDRPNNSLERFRHDRHGNLTRWTDARGVEWQIEYGPFDLPVGRLDGEGHRWQYRYDPDSLQLLEVINPQG ESYRYQLDADGRVTTETDYAGTQWHYAYDGNGNCIEKRDALNQVTRYDYDAAGQMTAMHTSEGRTTYAYDILGRLLEVTA PEAEPLTFEYDDKDRLIRETQAYGNITRDYPDNTQVTRTLLMPDGGQWTTATQANKTGELSLLNIHGGHRLSFERNEDGH ECYRQSDKGFILRQEHTLMGQLSWQRAGRNTRPEFFAADDLADIPQPTLSGLDREYRYDAALNLVAANDERQWLRYVVNG NGQVTSVSDGDRLREHYQYDACGYPARRFDGRHDIDNERLYQKGHRLRQAGQHLFEYDEAGRMTAMQLWQEGHRPQLTKY RWNSQNQLTGVLTPGGQQWEYRYDAFGRRIEKACQQAGSCTTYLWDGDQPAEIREYRHHRLYSIRHLVFDGWQLLAQQVQ FFTPNPENRSELIAGEVQTQYAVCAPTGEPLALFDPQGHRVWRQPQQSLYGMQLKAAGENAELNPEMQFAGQWLDAESGL VYNRFRYFSPEASVYLTPDPLGLLGGTNPYSYVHNPTGWIDPLGLVGCSTKLGKNMMENMGLSRSAKWSGYQAHHVIPKE LANHPALKKINYDIDVAANGIFLRKADNGVSAMARHQGNHHGYTDAVRNALDRIDLKQSKEAISKQVANIQDIAKKGMMD GNIIRSKDMYNTKIFGKDVNQIGRQRVFERWSKILG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rhs-core | AAN64198.1 | Rhs | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 62 |
