Gene Information

Name : fecI (XNC1_3739)
Accession : YP_003713867.1
Strain : Xenorhabdus nematophila ATCC 19061
Genome accession: NC_014228
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor fecI
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 3599307 - 3599843 bp
Length : 537 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 225425, 2651410, 2836368, 8596456; Product type r : regulator

DNA sequence :

ATGATACATTTAGCCATGTCTGAGCATACTGCCACTACAGCTCCTTTTACACTTGAATCGCTTTATGGCGCGCACCAGGG
TTGGCTGAAAACATGGCTCACCCGCAAACTCCAGTCGGCTTTTGATGCTGATGATATTGTTCAGGATACGTTTCTGCGGG
TAATGAGGAACGATTCGCTTGCATCCATCCGCGATCCCCGCTCCTTTTTATGCACTATTGCCAAACGGGTAATAGTTGAT
CTCTTCCGCCGTAATGCACTCGAGAAAGCCTATCTTGAGATGCTGGCGCAACTGCCAGAAGCGCACGCTCCCTCCTTAGA
AGTACGTGAAAGTCAGCTGGAAACCCTGCAACTGCTCGACAAAATGCTGGATGGCCTGAGCGGTAAAACCCGCGACGCGT
TTCTGCTTTCCCAGCTGGAAGGGCTAACCTATAACGACATCGCGTGCCGCCTGTCTGTTTCTGTCAGCTCGGTGAAAAAA
TACGTGGCCAGAGCAATGGAACACTGTCTGTTATTTCGTCTGGAGCACGGGCTTTGA

Protein sequence :

MIHLAMSEHTATTAPFTLESLYGAHQGWLKTWLTRKLQSAFDADDIVQDTFLRVMRNDSLASIRDPRSFLCTIAKRVIVD
LFRRNALEKAYLEMLAQLPEAHAPSLEVRESQLETLQLLDKMLDGLSGKTRDAFLLSQLEGLTYNDIACRLSVSVSSVKK
YVARAMEHCLLFRLEHGL

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	6e-59	79

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
fecI	YP_003713867.1	RNA polymerase sigma factor fecI	VFG1049	Protein	3e-59	79