|
Name : XNC1_4539 (XNC1_4539) Accession : YP_003714623.1 Strain : Xenorhabdus nematophila ATCC 19061 Genome accession: NC_014228 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG3523 EC number : - Position : 4338297 - 4341902 bp Length : 3606 bp Strand : - Note : Evidence 4 : Homologs of previously reported genes of unknown function DNA sequence : ATGAAATGGCCCTCTTTGTCATCTTTGGCACCTTTAAAATCAGCCTTGCCAGCGCTGGGAAAATTTAAATCCCTGCCTCG CTTTAAGGCTACGATGGCGGTGGTTCTGGCACTGATTCCCTGCCTGCTCCTGATCGCCGTCTGGTGGTGGGGTCAGGAAT GGAAAATCCGCAACGATTATCCGCTGGAAAGCCTTGCGGCCCGCTGGCTGGCAACCGCCATCATCATCATGGTGGTGTTG GTCTGGATCGGCATGAAAGCATGGCACCGCTTACGGACACTGGAAAAACTCAACCTGGATGTCGAACTGAAAGTCGTTGA TCCGGTGAGAGTGGATATTGAACATCAGGATCGCTATCTCGAACACTGGAAGTCCCAGTTGCAACGCCATCTGGATTCAT ACAATTATTTGTATGAACGCCCGTGGTATATGGTGGTCGGCAGTCAAAAAAGCGGCAAGACTTCGCTGATTAAGGAAGGC TATAAGCTGTCTGAAATTGCGGCCCCGGAATATTTGCGTCAGGATGATAACATCCCCCTGATGTTGCACTGCTGGTTAGG GGAAAAAGCGGTCATTATTGACCCGAAAGGCCAGTTGATTGATCAACCGGTTCCGCTTAACAGTGACAAGCCCCAAATCA ATAGCCGCCTGTGGGAAGCCATGCTGAATTGGTTGGCTGAAAACCGCCAGCGCCAGCCACTCAACGGTATTATTCTGACC GTGGATACCCTGCGTCTGCTGACTGATAACCGCGAGCAACGTGAACGCTATGTGCGGGAACTTCACCAGCGTCTGCAAGA CATTCGCCTGACTTTCCACAGCCAGTTGCCGCTTTATCTGGTGATGACCAAAATCGACCTGTTGCACGGTTTTGAAGCCA TGTACCAGTCACTGGATCGCAAATTGCGTGACCAGATCCTCGGGGTCACATTCAGCCTCAACAACCGGGATGAAAAAGCG TGGCGCAGTGAGCTGGAGCAGTTCTGGCAACAGTGGATGAACAACTTGAACAACGCGATGCCGGACATGATGCTGAACAA CGTGGATGCCAACCAGCGCAGCGCCCTGTTCAGTTTCACCCGTCAGATTCAGGGGTTGTACAGCTATGTTGTCCAGATGC TGGAAGATATTCTGTATAACGACGAACATCACCGCCCGACCCTGCGCGGAGTGTACCTGACTTCCGCACATCAGGTCGGG CAGATGGATGACTTGTTCACCCAATCCGCTTCGGCTCAGTACCATCTGGGTTCACAGGCGTTCCCGACATGGCCGGCGGG CGATACCCTGCCGTACTTTACCCATTCCCTGTTTGAAGACGTGCTGCTGGCCGAGCCGAATCTGGCGGCGGAAAACCGTA TCTGGCTGAGCCGCAACCGCCGTCAGTTATATACCTTCTCCACCCTCAGTGCCCTGGTCATTATGGCGATGTGGGGGGGC TGGCATTACTTCTACCAGAAAAACTACCGGGCGGGTGAAGAAGTGCTGGCGCAGGCGAAAAACTTCCTGTCCGTGCCGCC GCCGAAAGGGGATGACCGTTATGGCGATCTCCAGTTGTCACAACTGAACCCGATCCGTGACGCAACGCTGGCCTATGGTA ATTATCATGAAAATGCTTCTTTCCTGACGGACATGGCGCTGTATCAGGGTGGCAGTGTCGGGCCTTATGTGGCAACTACC TATCGGAAATTGCTGGAACAGCGTTTCCTGCCCGCCCTGATGCTGGGTCTGCTGGATGATCTGAATCAGGCCCCCGCGAG CAGTGAGGAAAAACTCGAGATCCTGCGAGTGATGCGCATGATGGAAGATAAAAGTCAGCGTAACAGCGCTTTGGTCGCCC AGTATATGCGTGAGCGCTGGAGTAAGGCCTTCCACGGCCAGCGCAATATACAGGATGCGTTGCTGACCCATCTGGATTAC GCCCTTGATCGAACCGACTGGAAAGAGTTGCGTGACAAAGGCGATAAAGAGGCCATAACCAACTTCGCCCCGTTTGTCAA ACCGATCCGGCAGGCGCAGGATGAGCTGAAAGCGCTCTCGGTCAAGCAGCGGGTTTACCAGAACCTGCGTATCCGGGCAC AGGATGTCCTGTCGGCACCGCTTAACCTGCGTGACCAGATTGGCCCGAGCTTTGATGATGTGTTTGTCGCCAGCAATGAA AAACGGCTGGTGATCCCGCAGTTACTGACCCGCCACGGGCTGATGGATTACTTCGTCCGGCAAAAAGATGAACTGACGAA ACTGACCGAGATGGACAGCTGGGTGCTGAACATAGCGAAGAATAATCAGGACAAAGCCAGCGAGGCGGGTTTGCAGAATA ACGACCAGTACAGCACCAAAGATCAGGAGCGGATACTGAACGATATCAATGACCTGTATTTGTCCGAGTATACCGCCACC TGGCGGGCGGCGATGAACAACCTCGAAGTGCGGGATTTTGATGATTTGCCCCACGCCATCAGTGCCATTGAACAGGTGAT CAGTGGCGAGCAACCCATCAAGCGGGCGCTGCAAATCCTGAGTGATAACACCAACCCGCCGCTGGCGGACAACGCGCTGA GCGAAAAACAGAAAGAAGATTGGCTGAAACAACACGATTACCGCCTGTTAAACCGTATCAGCCACGACTTCGCGCAGGAA ACGGAAGTGCTGGTGGAACGCGGCGACAAGGGCAGTACGCTGCAAAGCGTCTACCAGAAACTGACCGCCTTGCACCGTTA CCTGCTGGCGATCCAGAACTCGCCTGTCCCGGGCAAAGCCGCCCTGCAAGCGGTGCAGATGCGTCTGGACAAAAACAACA GTGACGCGATTTTTGAAGTACAGCAGATGGCGAAAACCTTGCCGGAGCCGCTGAACCGCTGGGTCGGCGAACTGGCGGAA CAGGCCTGGCGGGTGGTGATGATGGAGGCGATCCGTTCACTGGAAGTGGAATGGAACGACTCTGTGGTGAAACAGTACAA GACTTATCTGGCGGGACGTTATCCGTTCAACCCCAACGCGACCGAAGAAGTGCCGCTGAGCGAGTTTGAACGCTTCTTCC GGCCAGACGGCACGCTGGATACCTTCTACCAGCAGAGCCTGAAACCGTTTGTGGAGTACAACCTGACCACGGGGACGGAC GGCAAGGCGCTGATCCGGCCGGACGTGATGAAACAGCTGGAACTGGCGAACCGCATTCGCACCACCTTCTTTACCCCCCA AAACGGGCTGGGGGCTCAGTTTGCCATCGAACCGCTCAGCCTGACCGGCAACAAGCGCCGGGCCTTGCTGAACCTGGATG GCCAGCTGGTGGATTACTCCCACGGCCGCAGTAACGTGGCCCGTCTTATCTGGCCTAACTCCATGCGAGCCGGAACCGAG AGCAAGCTGACCCTGATGCCGGATCGCAGCAATCTGGCGCCGCGCTCCCTCAGTTTCATGGGCCCGTGGGCTCAGTTGCG GCTGATCAACAGTGGCAAGCTGACCAACGTCCAGCCGGGCTTCTTTGACGTGCGCTTTAGTGTGGATGGCGGCGACATGA CCTACCGTGTCTACGTGGACGAATCAGACAACCCCTTTGCTGGCGGGCTGTTCAGCCAGTTCAAACTACCGGATACCCTC TATTAA Protein sequence : MKWPSLSSLAPLKSALPALGKFKSLPRFKATMAVVLALIPCLLLIAVWWWGQEWKIRNDYPLESLAARWLATAIIIMVVL VWIGMKAWHRLRTLEKLNLDVELKVVDPVRVDIEHQDRYLEHWKSQLQRHLDSYNYLYERPWYMVVGSQKSGKTSLIKEG YKLSEIAAPEYLRQDDNIPLMLHCWLGEKAVIIDPKGQLIDQPVPLNSDKPQINSRLWEAMLNWLAENRQRQPLNGIILT VDTLRLLTDNREQRERYVRELHQRLQDIRLTFHSQLPLYLVMTKIDLLHGFEAMYQSLDRKLRDQILGVTFSLNNRDEKA WRSELEQFWQQWMNNLNNAMPDMMLNNVDANQRSALFSFTRQIQGLYSYVVQMLEDILYNDEHHRPTLRGVYLTSAHQVG QMDDLFTQSASAQYHLGSQAFPTWPAGDTLPYFTHSLFEDVLLAEPNLAAENRIWLSRNRRQLYTFSTLSALVIMAMWGG WHYFYQKNYRAGEEVLAQAKNFLSVPPPKGDDRYGDLQLSQLNPIRDATLAYGNYHENASFLTDMALYQGGSVGPYVATT YRKLLEQRFLPALMLGLLDDLNQAPASSEEKLEILRVMRMMEDKSQRNSALVAQYMRERWSKAFHGQRNIQDALLTHLDY ALDRTDWKELRDKGDKEAITNFAPFVKPIRQAQDELKALSVKQRVYQNLRIRAQDVLSAPLNLRDQIGPSFDDVFVASNE KRLVIPQLLTRHGLMDYFVRQKDELTKLTEMDSWVLNIAKNNQDKASEAGLQNNDQYSTKDQERILNDINDLYLSEYTAT WRAAMNNLEVRDFDDLPHAISAIEQVISGEQPIKRALQILSDNTNPPLADNALSEKQKEDWLKQHDYRLLNRISHDFAQE TEVLVERGDKGSTLQSVYQKLTALHRYLLAIQNSPVPGKAALQAVQMRLDKNNSDAIFEVQQMAKTLPEPLNRWVGELAE QAWRVVMMEAIRSLEVEWNDSVVKQYKTYLAGRYPFNPNATEEVPLSEFERFFRPDGTLDTFYQQSLKPFVEYNLTTGTD GKALIRPDVMKQLELANRIRTTFFTPQNGLGAQFAIEPLSLTGNKRRALLNLDGQLVDYSHGRSNVARLIWPNSMRAGTE SKLTLMPDRSNLAPRSLSFMGPWAQLRLINSGKLTNVQPGFFDVRFSVDGGDMTYRVYVDESDNPFAGGLFSQFKLPDTL Y |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pmt1 | AAN64194.1 | Pmt1 | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 68 |
| aec30 | AAQ96724.1 | Aec30 | Not tested | AGI-1 | Protein | 0.0 | 53 |
| aec30 | YP_851415.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 53 |
