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Name : secD (AOLE_02660) Accession : YP_003730806.1 Strain : Acinetobacter oleivorans DR1 Genome accession: NC_014259 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 562621 - 564522 bp Length : 1902 bp Strand : - Note : COG0342 Preprotein translocase subunit SecD DNA sequence : ATGCGTTACCCTGCATGGAAATATTTACTGATTCTGGTTGTTCTGGTAGTCAGTACATTATACGCACTGCCTAGTCTATA TCCGGATGAGCCCGCCGTTCAAATTTCCGGTGCCAAAGCTGGTACCCAAATTGATCAAAGTGTGGTGCAAAAAGCAGAGC AAATTTTAAAAACAGCAAATATTGCAAGTCACGATAATACTTTTACAAATAATGCTGCCCTCTTGCGTGTCAGCTCTTCT GAAGCGCAGTTGAAAGCAAAAGAAGTATTACGCCGTGACTTAGGTGATCAATATGTTGTTGCCCTAAACCTTGCACCAAC CACACCGGAATGGTTGCAAAAAATTGGGGCAAAACCAATGAAACTTGGTTTGGACTTACGTGGTGGTGTCCACTTCTTGC TTGAAGTAGATATGGACAAAGCCGTTGCCCAACGTATGGAAACCTCTGCCACTGATTTGCGTCGTCAGTTCCGTGAAAAC AAGATCAAATTTAATAATCTTGCATTAACAAACAATGTAATCACTGTTCAATTTGCTGACAATGCTGACCGTGATGCAGC AATGGATTTTCTACGTCGTAATGGGAATGAATATACCCAACAGGCATTAGCAAGCTCTACAGGTTCTACTTTAAAGCTTA CTTATACCGATGTACGTCGCCAAGAAATCCAGTCATATGCGGTAAACCAAAACTTAACAACATTACGTAATCGTATTAAC GAACTTGGTGTTGCAGAAGCATTGGTACAAAGTCAGGGTAGCAACCGTATTGTTGTTGAATTACCGGGTGTACAAGATAC AGCTGAAGCTAAACGTGTTTTAGGTCGTACTGCAAACCTCGAATTCCGTTTAGTTTCTGACTCAAATGATCAATATATTG ACCCATATACAGGTAAATATAATGGTCAACCTTTACCTCCGGGCACAGAAGTTTTTGCTTATGAGTCTTTAGATAGCGGT CGTCAACTTTTGTTGCAACGTAACCGTATCTTGACTGGTGAGCGTGTTCAAAATGCAAGTTCTGGCTTCAGCCAAGACTC TGGTGGTGCCGAGGTAAATATTACCCTCGACAGTGCTGGTGGTAAGCTTATGTCCGATGCAACTCGTAATGCTGTTGGTA AACGCATGGCGGTATTGTTCATCGAAAATAAGCAAAAAATTACTTATGTCACAGATCCTAAAACTGGTGCACAAACAGAA GTTCGTACTCCATACACTGAATCTGTAGTCATTAATGCTGCAACTGTTCAAGCCGTTTTAGGTTCAACTTTCCGTATTAC CGGTTTAAGTTCTCCTCAAGAAGCATCAGAGCTTGCATTAATGCTACGTGCAGGTGCTTTAGCTGCGCCAATGTATTTTG TTGAAGAACGTGTGGTTGGTCCAAGTCTTGGTCAAGAAAACATTGATAAAGGCGTATTATCAACTCAAATCGGCTTCTTG CTTGTTGCAATCTGGATGGTGGTTTTCTTCCGTCTATTCGGTTTAATCGCTAACTTTGCACTTGTTGTTAACTTGGCAAT GATTTTAACGGTTATGTCATGGATTGGAGCTTCCCTCACCTTACCAGGTATTGCCGGTATCGTTATTACCATTGGTATGG CGGTCGATGCGAACGTATTAATATGTGAGCGTATTCGAGAAGAAATGCTCTGGGGAGCCTCACCCAAACAGGCCATTGTG GCCGGTTATGATCGAGCTTATAACACCATTTTTGACTCGAACTTAACCACGTTCCTCGTTGCTTTCATTTTGTTTGCAAT TGGTACAGGCCCGATCAAAGGTTTCGCCGTAACATTAATGATTGGTATTGTGTGTTCGATGTTTACTGCAATTACAGTGA CTCGCGCAATTGTACAAATCATTTATGGCAAACGCCGTAACTTGAAAAAGTTGAGCATTTAA Protein sequence : MRYPAWKYLLILVVLVVSTLYALPSLYPDEPAVQISGAKAGTQIDQSVVQKAEQILKTANIASHDNTFTNNAALLRVSSS EAQLKAKEVLRRDLGDQYVVALNLAPTTPEWLQKIGAKPMKLGLDLRGGVHFLLEVDMDKAVAQRMETSATDLRRQFREN KIKFNNLALTNNVITVQFADNADRDAAMDFLRRNGNEYTQQALASSTGSTLKLTYTDVRRQEIQSYAVNQNLTTLRNRIN ELGVAEALVQSQGSNRIVVELPGVQDTAEAKRVLGRTANLEFRLVSDSNDQYIDPYTGKYNGQPLPPGTEVFAYESLDSG RQLLLQRNRILTGERVQNASSGFSQDSGGAEVNITLDSAGGKLMSDATRNAVGKRMAVLFIENKQKITYVTDPKTGAQTE VRTPYTESVVINAATVQAVLGSTFRITGLSSPQEASELALMLRAGALAAPMYFVEERVVGPSLGQENIDKGVLSTQIGFL LVAIWMVVFFRLFGLIANFALVVNLAMILTVMSWIGASLTLPGIAGIVITIGMAVDANVLICERIREEMLWGASPKQAIV AGYDRAYNTIFDSNLTTFLVAFILFAIGTGPIKGFAVTLMIGIVCSMFTAITVTRAIVQIIYGKRRNLKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-143 | 52 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-143 | 52 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 7e-143 | 52 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 7e-143 | 52 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 7e-143 | 52 |
