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Name : secD (EbC_09790) Accession : YP_003740367.1 Strain : Erwinia billingiae Eb661 Genome accession: NC_014306 Putative virulence/resistance : Unknown Product : protein-export membrane protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 1152749 - 1154596 bp Length : 1848 bp Strand : + Note : silverDB:661Eb01331 DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACATCATGCTGATCGTCGTGTTACTCGGCGGCCTGCTGTACGCACTTCCCAA CCTGTATGGTGAGGATCCGGCCGTTCAGATCACTGGTGCGCGCGGAAGCGCCGCCAGTGAGCAGACGCTGGTTCAGATCC AAGATGCCTTGAAGCAAGATAATATCCAGAGCAAATCCATTGCACTGGAAAATGGCGCAATTCTGGCGCGTTTCGCAAAC GGTGACGTGCAGCTGCGTGCCCGTGATGCCATTACCAAAGTGTTGGGTGAAGACTTCGTTGTCGCGCTTAACCTTGCTCC CGCAACGCCAACCTGGCTGACCTTGCTGGCCGCAGAGCCGATGAAACTCGGTCTCGATCTGCGCGGCGGCGTACACTTCC TGATGGAAGTCGATATGGATACCGCTCTGGGTAAACTCCAGGAGCAGAACATCGATAACCTCAGAAGCGATCTGCGTGAC AAAAACATTCCTTATACCAACGTTCGCAAAACCGACAATTACGGTCTGGAAATTCGTTTCCGTGATGCCGCGTCGCGTGA TGCTGCCGTCAGCTATCTGTCGGACCGCCATCGTGACCTGGTGATCAGCGGAACCAGCGGTAATACCCTGCGAGCGGTGA TGACTGACGATCGTCTGCGTGAAGCCCGTGAATATGCGGTTCAGCAGAACATCAATATCCTGCGTAACCGTGTTAACCAG CTTGGCGTAGCCGAACCGCTGGTTCAGCGTCAGGGTTCCGATCGTATTGTGGTTGAGCTGCCTGGTATCCAGGACACGGC CCGTGCGAAAGAAATTCTGGGCGCGACCGCCACGCTGGAATTCCGTCTGGTGAACACCACTGTTGATCCAACCGCTGCGG CTAACGGCCGTGTACCGGGTGATTCAGAAGTGAAAAACACCCGTGACGGTCAGCCAGTGACCCTGTACAAGCGCGTGATC CTGACCGGTGACCACATTACTGACTCCACGTCGAGCCAGGATGAGTACAACCAGGCACAGGTGAACATCTCGCTGGACAG CGCAGGCGGTAACATCATGTCCAACTTCACCAAGGATAATATCGGTAAGCCGATGGCAACGCTGTTTGTGGAATACAAAG ACAGCGGTAAGAAAGATGCCAACGGCCGTGCGATCCTGGCGAAGCAGGAAGAGGTGATCAACGTTGCGAACATCCAGTCC CGGCTGGGTAACAGCTTCCGTATTACCGGCATCAGCAACCCGAACGAAGCCCGCCAGCTGTCACTGCTGCTGCGTGCCGG TGCGTTGATTGCGCCAATCCAGATTGTTGAAGAACGTACCATTGGTCCAACCATGGGTGCGCAGAACATCACTCAGGGTC TGGAAGCCTGTCTGTGGGGCCTGATCGCCTCTATCGTGTTTATGGTGGTTTACTACCGTAAGTTCGGTGTGATTGCCACC TCGGCGCTGGTGGCTAACCTGGTGCTGATTGTCGGCATCATGTCGCTGCTGCCGGGTGCAACGCTGACCATGCCGGGTAT TGCCGGTATCGTATTGACGCTGGCGGTTGCGGTGGATGCGAACGTACTGATTAACGAGCGTATCAAGGAAGAGATCAAGA ATGGACGTTCCATTCAGCAAGCTATCCATGAAGGCTATAAAGGCGCGTTCTCCAGTATTGTCGATGCCAACGTCACCACG CTGATCACTGCAATTATTCTGTATGCGGTGGGCACCGGGTCAATCAAAGGCTTTGCAATTACGACCGCGATTGGCGTCGT GACCTCGATGTTTACCGCCATTGTCGGTACCCGTGCCCTCGTCAACCTGTTGTACGGCGGCAAACGCATCACCAAGCTGT CTATCTGA Protein sequence : MLNRYPLWKYIMLIVVLLGGLLYALPNLYGEDPAVQITGARGSAASEQTLVQIQDALKQDNIQSKSIALENGAILARFAN GDVQLRARDAITKVLGEDFVVALNLAPATPTWLTLLAAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDNLRSDLRD KNIPYTNVRKTDNYGLEIRFRDAASRDAAVSYLSDRHRDLVISGTSGNTLRAVMTDDRLREAREYAVQQNINILRNRVNQ LGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEFRLVNTTVDPTAAANGRVPGDSEVKNTRDGQPVTLYKRVI LTGDHITDSTSSQDEYNQAQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILAKQEEVINVANIQS RLGNSFRITGISNPNEARQLSLLLRAGALIAPIQIVEERTIGPTMGAQNITQGLEACLWGLIASIVFMVVYYRKFGVIAT SALVANLVLIVGIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEEIKNGRSIQQAIHEGYKGAFSSIVDANVTT LITAIILYAVGTGSIKGFAITTAIGVVTSMFTAIVGTRALVNLLYGGKRITKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-108 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-108 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 6e-109 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-108 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-108 | 48 |
