Gene Information

Name : EbC_28810 (EbC_28810)
Accession : YP_003742259.1
Strain : Erwinia billingiae Eb661
Genome accession: NC_014306
Putative virulence/resistance : Resistance
Product : MATE efflux family protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0534
EC number : -
Position : 3205092 - 3206528 bp
Length : 1437 bp
Strand : -
Note : silverDB:661Eb03823

DNA sequence :
TTGCAAAACTTCAGAGTCTCTCTGCTGCAGGCGATCAAAAATACGGCGTGGTATCCCAAAAGACATTCCTACCGAGTTTT
ATTCTGGCGAGAAATCACCCCGCTGGCCGTGCCGATCTTCTTCGAGAACCTTTGCGTCCTGCTAATGGGGGTGCTCAGCA
CCTTCCTGGTGAGCTGGCTGGGCAAAGAGGCGATGGCGGGAGTGGGGCTGGCAGACAGCTTCAATATGGTGATTATCTCC
TTCTTCGCCGCCATCGATCTTGGTACTACCGTGGTGGTGGCCTTCAGTCTGGGAAAACTCAATCGCGAACGGGCGGAAGC
GGCAGCCAGACAGTCGCTGGTGCTGATGACGCTATTTGCCGTGTTGCTCGCGCTGCTGATCGAGTTCTTTGGCGTACAGA
TTATTGATGTGATTGCCGGCAGTGCCGAACCGGCGGTGAAAGCGCTGGCGTTGGATTACCTGACCATCAGCGCCTGGAGT
TATCCCGCAGCGGCCATCGCGCTGATTGGCTGTGGCGCACTGCGCGGCGCAGGCAACACTAAAATTCCAATGCTGATCAA
CGGCGGAATGAACATTCTGAATATCGTGATCAGTACCGCGCTGATTTACGGCTGCTTTGGCTGGAAAGGGCTGGGCTTCG
ATGGCGCGGCCGTCGGCTTAACCATCTCGCGCTATATCGGCGCGCTGGCGGTGATTTACGTGCTGATGATCGGCTTTAAC
CCGCGTTTAAAAATCACCCTGAAAAGCTACTTCACGCGACTCAATACCAGCATCCTGATGGAAGTGCTGGGAATTGGCGT
GCCGGCCAGTATTGAATCGGTGCTGTTTAACGGCGGCAAGCTGCTGACGCAAATCTTTGTCGCCGGGATGGGCACCGACG
TTATCGCCGGTAACTTTATCGCCTTCTCGATTGCCTCGATGATTAACCTGCCGGGGAACTCGCTGGGGTCGGCCTCCACC
ATCATTGTCGGAACGCGATTAGGCCGGGGCCAGCTGCTGCAGCCGGAACGTCAGCTCCGGCATATCTTCTGGCTATCCAC
CATTGGCTTATGTTTACTGGCGGCGATAACGGTGCCGTTCGCCGGTATCCTCGCGTCGTTCTACACCAAGGATCCCGATG
TCATCCACGTGGTGAAAATCCTGGTCTGGCTGAACGCGGCGTTTATGCCTTTCTGGGCGGCCTCGTGGGTCTTGCCCGCC
GGGTTGAAAGGGGCGCGCGATGCGCGATTCACCATGTGGATCTCGCTGTTGGGCATGTGGGGCGCCCGCATCGTGGCCGG
TTACACGCTCGGTGTGGTATTGGGATTCGGCGTGGTGGGTATCTGGCTCGGCATGTTTATGGACTGGATTGTGCGTGGCT
TCTTCTTCTATCGCCGTCTGAACAGCGGCCGCTGGCTGTGGAAATACAAAAAGCCGGCAGTGTCATCTGCTCAGTAA

Protein sequence :
MQNFRVSLLQAIKNTAWYPKRHSYRVLFWREITPLAVPIFFENLCVLLMGVLSTFLVSWLGKEAMAGVGLADSFNMVIIS
FFAAIDLGTTVVVAFSLGKLNRERAEAAARQSLVLMTLFAVLLALLIEFFGVQIIDVIAGSAEPAVKALALDYLTISAWS
YPAAAIALIGCGALRGAGNTKIPMLINGGMNILNIVISTALIYGCFGWKGLGFDGAAVGLTISRYIGALAVIYVLMIGFN
PRLKITLKSYFTRLNTSILMEVLGIGVPASIESVLFNGGKLLTQIFVAGMGTDVIAGNFIAFSIASMINLPGNSLGSAST
IIVGTRLGRGQLLQPERQLRHIFWLSTIGLCLLAAITVPFAGILASFYTKDPDVIHVVKILVWLNAAFMPFWAASWVLPA
GLKGARDARFTMWISLLGMWGARIVAGYTLGVVLGFGVVGIWLGMFMDWIVRGFFFYRRLNSGRWLWKYKKPAVSSAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yeeO YP_853088.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-132 72

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EbC_28810 YP_003742259.1 MATE efflux family protein BAC0146 Protein 6e-145 76