Gene Information

Name : glcF (RCFBP_10780)
Accession : YP_003744725.1
Strain : Ralstonia solanacearum CFBP2957
Genome accession: NC_014307
Putative virulence/resistance : Unknown
Product : glycolate oxidase iron-sulfur subunit
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0247
EC number : 1.1.3.15
Position : 813495 - 814742 bp
Length : 1248 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8606183; Product type e : enzyme

DNA sequence :
ATGCAAATCACGCTCGCGGCATTCCTGCAGCACACCCCCGACGGCGAAGAAGCCCAGGGCATCGTGCAGAAGTGCGTGCA
CTGCGGTTTCTGCACGGCCACCTGTCCGACCTACCAGTTGCTCGGCGACGAGCTCGACGGGCCGCGCGGCCGCATCTACC
TGATGAAGCAGGTGCTGGAAGGCCAGCCGGCCGGCGAGCGCACCCGCCTGCACCTGGACCGCTGCCTGACCTGCCGCAAC
TGCGAATCGACCTGCCCATCGGGCGTGACCTACGGCCGGCTGGTCGAGATCGGCCGCAAGATCGTCGAGGACCAGCTCGA
CGCGCAAGGCGCCGCGCGCCCGCTGGCCGAACGCGCGATGCGCTGGGTGCTGCGCGAGGCGCTGACGCGACCGAAACTGT
TCGGCCCCGCGCTCAGGCTGGGCCAGGCCGTGCGCCCGCTGCTGCCGCCCGTGCTGCGCAACAAGGTGCCGGCCAAGGCG
CCGCTGCCCGGCACACGGCCCACCGCCTCCCATGCGCGCAAGATGCTGCTGCTGGAAGGCTGCGTGCAGCCGGCCATGTC
GCCCAATATCAACGCAGCCACGGCGCGCGTCTTCGACCGGCTCGGCGTGCAGCTGATCAGCGCACCGCGTGCCGGCTGCT
GCGGCGCGATCCGCTATCACATGAACGACCACGCGGGCGGCCTCGGCAACATGCGCGCCAACGTCGACGCCTGGTGGCCG
CACATTGAGGCCGGCGCCGAGGCCATCGTCATGACGGCCTCCGGCTGCGGCGCGATGGTCAAGGAATACGGCCACCTGCT
GCGCGGCGATCCGGCCTATGCCGAACGGGCCGCGCGCGTATCGGCCATGACGCGCGACCTGTGCGAGGTGCTGCCCGCCT
TCTCCGACCAGTTGCTGCGGCAGGCCAAACCCGAAACCCACCGGCCCCGCGTGGCCTGGCACGCGCCTTGCACGCTGCAG
CACGGCCAGCAGATCCGCGGCGCGGTGGAAGGCCTGCTCGCTTCGCTGGGCGTGGAGGTGCGGCTCTGCACCGACAGCCA
CCTGTGCTGCGGGTCGGCAGGCACCTATTCGGTGCTGCAGCCGGAACTGGCGTATCGGCTGCGCGACGACAAGCTGCGCA
GCTTGCTTGCCACGCAGCCAGAACGTATCGTGTCGGCCAACATCGGCTGCGTGACGCATCTGCAAAGCGGCACCGACACG
CCGGTCGAGCATTGGATCGAACTGGTGGACCGCATGCTGGCCGGATAA

Protein sequence :
MQITLAAFLQHTPDGEEAQGIVQKCVHCGFCTATCPTYQLLGDELDGPRGRIYLMKQVLEGQPAGERTRLHLDRCLTCRN
CESTCPSGVTYGRLVEIGRKIVEDQLDAQGAARPLAERAMRWVLREALTRPKLFGPALRLGQAVRPLLPPVLRNKVPAKA
PLPGTRPTASHARKMLLLEGCVQPAMSPNINAATARVFDRLGVQLISAPRAGCCGAIRYHMNDHAGGLGNMRANVDAWWP
HIEAGAEAIVMTASGCGAMVKEYGHLLRGDPAYAERAARVSAMTRDLCEVLPAFSDQLLRQAKPETHRPRVAWHAPCTLQ
HGQQIRGAVEGLLASLGVEVRLCTDSHLCCGSAGTYSVLQPELAYRLRDDKLRSLLATQPERIVSANIGCVTHLQSGTDT
PVEHWIELVDRMLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcF CAE85243.1 GlcF protein Not tested PAI V 536 Protein 7e-107 54