|
Name : glcD (RCFBP_10782) Accession : YP_003744727.1 Strain : Ralstonia solanacearum CFBP2957 Genome accession: NC_014307 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit glcd Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 815915 - 817408 bp Length : 1494 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8606183; Product type e : enzyme DNA sequence : ATGAACGCGCCGCTGCCCGCCTCTGCCCGCGATCCGTCCGCCGTCCAGGCCGAACTGATCGCCGCGCTATCGCCCCTGGT GCCCGCCGATGCCCTGCTGTGGGCGCGCGAAGACACCACCCCTTACGAATGCGACGGCCTCGCCGCCTACCGGCAGGTGC CGCTGGCCGTGGTGCTGCCGGACAGCGAAACGCAGGTGGTGGCGATCCTGCGCGCCTGCCATCGCCTGGGCGTGCCGGTG GTGCCGCGCGGCGCCGGCACCAGCCTGTCGGGCGGCGCGATGCCGACGCCGGGCGGGCTGGTGCTGTCGCTGGCCAAGTT CAAGCGCATCCTCAAGCTGGACGCCCTCACCCGCACGGCGATCGTGCAGCCGGGTGTGCGCAACCTGGCCATCTCGGAAG CCGCCGCGCCGCACGGACTGTATTACGCGCCCGATCCCTCATCGCAGATCGCCTGCACCATCGGCGGCAACGTCAGCGAG AACTCCGGCGGCGTGCACTGCCTGAAATACGGCCTGACCGTGCACAACGTGCTGCGCGTGCGCGCCGTGACGATGGACGG CGAGGTGGTCGAGTTCGGCAGCGAGGCGCCCGATGCGCCCGGCCTGGACCTGCTCGCCGCCGTGATCGGCTCCGAAGGCA TGCTGGCCGTGGTGACGGAAGTGACCGTGCGGCTGGTGCCCAAACCGCAGCTCGCGCAGGTCATCATGGCGAGCTTCGAC GATGTGGAAGCGGGCGGCAACGCGGTGGCGGAGGTGATCGCCGCCGGCATCATCCCGGCCGGCCTGGAGATGATGGACAA ACCCGCCACCGCCGCCGTCGAGGAGTTCGTCCGCGCCGGCTACGACCTCGATGCCGCCGCCATCCTGCTGTGCGAATCCG ACGGCACGCCCGAAGAGGTGGCCGAGGAGATCGCCCGCATGAGCGAGGTGCTGCGCGCCTGCGGCGCCACCCGCATCCAG GTGTCGCAGAGCGAGGCCGAGCGGCTGAAGTTCTGGAGCGGCCGCAAAAACGCCTTCCCGGCCGCCGGACGCATCTCGCC GGACTACTACTGCATGGACGGCACCATCCCGCGCAAGCACATCGGCACGCTGCTCAAGCGCATCCAGCGGATGGAGCAGA AGTACGCGCTGCGCTGCATCAACGTCTTCCACGCCGGCGACGGCAACATGCACCCGCTGATCCTCTTCAACGGCGACGAC CAGGACGAATGGCACCGCGCCGAGCTGTTCGGCGCGGACATCCTCGAGGCCTGCGTGGAGCTGGGCGGCACCGTCACCGG GGAACATGGCGTGGGGGTCGAAAAGCTCAATTCGATGTGCGTGCAGTTCTCGGCCGAGGAGCGCGATGCCTTCCTGCGCG TCAAGGCCGCCTTCGACCCGGCGCGCCTGCTGAACCCCGACAAGGCCATCCCCACGCTCGCGCGCTGCGCCGAATACGGC AAGCTGCATGTGCGCAACGGCCTGCTGCCGCACCCCGACCTGCCGCGCTTCTGA Protein sequence : MNAPLPASARDPSAVQAELIAALSPLVPADALLWAREDTTPYECDGLAAYRQVPLAVVLPDSETQVVAILRACHRLGVPV VPRGAGTSLSGGAMPTPGGLVLSLAKFKRILKLDALTRTAIVQPGVRNLAISEAAAPHGLYYAPDPSSQIACTIGGNVSE NSGGVHCLKYGLTVHNVLRVRAVTMDGEVVEFGSEAPDAPGLDLLAAVIGSEGMLAVVTEVTVRLVPKPQLAQVIMASFD DVEAGGNAVAEVIAAGIIPAGLEMMDKPATAAVEEFVRAGYDLDAAAILLCESDGTPEEVAEEIARMSEVLRACGATRIQ VSQSEAERLKFWSGRKNAFPAAGRISPDYYCMDGTIPRKHIGTLLKRIQRMEQKYALRCINVFHAGDGNMHPLILFNGDD QDEWHRAELFGADILEACVELGGTVTGEHGVGVEKLNSMCVQFSAEERDAFLRVKAAFDPARLLNPDKAIPTLARCAEYG KLHVRNGLLPHPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 1e-137 | 60 |
