Gene Information

Name : cyaB (RPSI07_mp0280)
Accession : YP_003749274.1
Strain :
Genome accession: NC_014310
Putative virulence/resistance : Virulence
Product : type I (cyclolysin-type) secretion system ATP-binding component, ABC transporter, transmembrane region
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG2274
EC number : 3.6.3.43
Position : 340112 - 342286 bp
Length : 2175 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 7830567; Product type e : enzyme

DNA sequence :
ATGACCAGCACCTCCATCGACACCCCAGCCCCGCCAGGGCCCGAGCCCACGCGCGCGGACATCGACACCGCCCTGGCCTG
CATCCTGATGATGGCCCGCCTGCACGGCATCGCCGCGGAGGAAGCGCAGTTGCGCCACGAGTTCGGCCACCGCGCGTTCG
ATACGCAGACGGCGCTGCTGGCCGCCAAGCATCTGGGCCTGTCGGCCAAGGTGGTGCGCCAGCCGATGGAGCGGCTGCAC
CGGGCGCCACTGCCGGCCATCGCCATCGACCAGTCCGGTCAGCACTTCATCTTGGCCAAGTACGACGCAACCAATGCCGA
CGAGCCCAAGCTGCTGATTCAGCGGCCCGGCCACCCGCCGAGCGTGCTGACGCTGCAGGACTTTCTCGCGGTGTGGTCCG
GCGAGCTGGTCCTGTGCACCAGCAAGGCGACCTTCGCCGGCGACATGGCGAAATTCGACTTCACGTGGTTCATCCCCGCC
GTCGTCAAATACCGGAAGCTGCTGGGCGAAGTCCTGCTGGTGTCGCTCACGCTGCAGATCATCGGGCTGGTGACGCCGAT
GTTCTTCCAGGTGGTGATGGACAAGGTGCTGGTCAATCACGCCATGAAGACGCTGAACGTGATCGCCATCGGCCTGATCT
GCGCGATCCTGTTCGAGGTCACGCTCACGGGGATCCGTACCTGGGTGTTCGCGCATACCAGCAGCAAGATCGACGTGGAG
CTCGGCGCACGGCTGTTCCGGCATCTGCTGAGCCTGCCGCTGGCGTACTTCCAGTCCCGGCGCGTGGGCGATTCGGTGGC
GCGGGTGCGCGAGCTGGAGAACATCCGCAGCTTCCTGACCGGCAATGCCATGACGGTGGTGCTGGACCTGCTGTTTTCGT
TCGTGTTCCTGGCGGTGATGCTGTGGTACAGCGTGTGGCTGACGCTGATCGTGGTGGTGTCGATTCCGCTGTATATCGGG
CTGTCGGCCGTGTTCACGCCCATCATCCGCGCGCGGCTGGACGTCAAGTTCAACCGCAACGCCGAGAACCAGTCGTTCCT
GGTGGAGACCATCAGCGGCATCGATACCGTCAAGGCGATGGCCGTGGAGCCGCGCTGGACGCACAAGTGGGACCAGCAGC
TCGCCGCGTACGTCACCGCCGGGCTGGCGGTCACCAATGTGGCGACGGTCGCCAGCAGCGGCGTCACGCTGGTCAGCAAG
CTGGTGACGGCGGCCATCATGTGGCTCGGGGCGACGCTGGTGATCGACCACAAGATGACCGTGGGCGAACTGGTGGCCTT
CAACATGCTGGCCGGACAGGTGTCGTCGCCCATTCTGCGGCTGGCCCAGCTGTGGAACGATTTCCAGCAGGTGGGGATTT
CGATGAGCCGGCTGGGTGACATCCTGAACGCGCGCACCGAGGTTGCCGGCCAGAAGTCGCGTCTGCCGAAGCTGGCCGGT
GCGATTGCGTTCGACCAGGTGGGCTTCCGCTACCGGCCCGATGCGCCCGATGTCATCCGGGGGATTTCGCTCGCGATCAT
GCCGGGCGAGGTGATCGGCATCGTCGGCCGTTCGGGATCGGGCAAGAGCACGCTGACCAAGCTGGTGCAGCGCCTGTATG
TGCCGGAGAGGGGACGCGTGCTGATCGACGGGCAGGATATCGCCATTGTCGATACGACTTCGCTGCGGCAGCAGATCGGT
GTCGTGCTGCAGGAGAACACGCTGTTCAGCCGCTCCATCCGCGACAACATCGCCCTGACGAATCCGGCGGCGCCGCTGGA
GGCCATCATCGAAGCCGCCAGGCTGGCCGGCGCGCACGAGTTCATCTGCGAGCTGCCGGAAGGCTACGACACGATCGTCG
GCGAGCACGGCACGGGCCTGTCGGGCGGGCAGCGCCAGCGCATTGCCATTGCGCGCGCGCTGCTGACGAATCCGCGCATC
CTCATCTTCGATGAGGCGACCAGCGCGCTGGACTACGAGTCGGAGAAGATCATCCAGGACAACATGCGGCGCATCTGCCA
GGGGCGCACCGTGCTGATCATCGCGCACCGGCTGTCGGCGGTGCGTGAGGCCAACCGCATCATCGTCATGGAACGTGGCC
AGGTTGCGGAAATGGGCAGCCACGACCAGCTGCTCCAGAACCCGCAGGGCATCTACGCGCATCTGTACGCCCTCCAGCAG
GGAGGTGCGGCATGA

Protein sequence :
MTSTSIDTPAPPGPEPTRADIDTALACILMMARLHGIAAEEAQLRHEFGHRAFDTQTALLAAKHLGLSAKVVRQPMERLH
RAPLPAIAIDQSGQHFILAKYDATNADEPKLLIQRPGHPPSVLTLQDFLAVWSGELVLCTSKATFAGDMAKFDFTWFIPA
VVKYRKLLGEVLLVSLTLQIIGLVTPMFFQVVMDKVLVNHAMKTLNVIAIGLICAILFEVTLTGIRTWVFAHTSSKIDVE
LGARLFRHLLSLPLAYFQSRRVGDSVARVRELENIRSFLTGNAMTVVLDLLFSFVFLAVMLWYSVWLTLIVVVSIPLYIG
LSAVFTPIIRARLDVKFNRNAENQSFLVETISGIDTVKAMAVEPRWTHKWDQQLAAYVTAGLAVTNVATVASSGVTLVSK
LVTAAIMWLGATLVIDHKMTVGELVAFNMLAGQVSSPILRLAQLWNDFQQVGISMSRLGDILNARTEVAGQKSRLPKLAG
AIAFDQVGFRYRPDAPDVIRGISLAIMPGEVIGIVGRSGSGKSTLTKLVQRLYVPERGRVLIDGQDIAIVDTTSLRQQIG
VVLQENTLFSRSIRDNIALTNPAAPLEAIIEAARLAGAHEFICELPEGYDTIVGEHGTGLSGGQRQRIAIARALLTNPRI
LIFDEATSALDYESEKIIQDNMRRICQGRTVLIIAHRLSAVREANRIIVMERGQVAEMGSHDQLLQNPQGIYAHLYALQQ
GGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 0.0 56
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 0.0 56
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 0.0 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cyaB YP_003749274.1 type I (cyclolysin-type) secretion system ATP-binding component, ABC transporter, transmembrane region VFG1269 Protein 0.0 66
cyaB YP_003749274.1 type I (cyclolysin-type) secretion system ATP-binding component, ABC transporter, transmembrane region VFG1501 Protein 0.0 56
cyaB YP_003749274.1 type I (cyclolysin-type) secretion system ATP-binding component, ABC transporter, transmembrane region VFG0907 Protein 0.0 56
cyaB YP_003749274.1 type I (cyclolysin-type) secretion system ATP-binding component, ABC transporter, transmembrane region VFG1557 Protein 0.0 56
cyaB YP_003749274.1 type I (cyclolysin-type) secretion system ATP-binding component, ABC transporter, transmembrane region VFG0841 Protein 2e-173 55