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Name : secD (RPSI07_0796) Accession : YP_003751466.1 Strain : Ralstonia solanacearum PSI07 Genome accession: NC_014311 Putative virulence/resistance : Unknown Product : SecYEG protein translocase auxillary subunit Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 800560 - 802440 bp Length : 1881 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 9305629; Product type t : transporter DNA sequence : ATGAACCGCTATCCGCTCTGGAAATACCTTGTGATCCTGATGGCGCTCGCCATCGGGTTCCTCTATACGCTGCCGAACTT CTTCGGTGAAGCGCCCGCCGTCCAGGTGTCATCGGGCAAGGCCACCGTCAAGGTCGACCTGGCGACACAAAAGCAGGTCG AAAGCCTCCTCGCCGCCGCCAACCTGAAGCCGGACGGCGTGTTCTTCGACCTGAACGGCACCTCGGGCAGCGTGCGCGTA CGCTTTGCCGACACCGACACCCAGCTCAAGGCCAAAGACGTCCTGACGCACGGCCTGAACAACGATCCGACCGACCCGAC CTACATCGTCGCGCTGAACCTGCTGTCGGGTTCGCCGCGCTGGCTGACCTCCATCCACGCCCTGCCGATGTTCCTGGGCC TGGACCTGCGCGGCGGCGTGCACTTCCTGCTGCAGGTCGACATGAACGGCGCGCTGACCAAGAAGCTCGATTCGCTGGCC GGTGATATCCGCACGCAACTGCGCGACAAGGGCATCCGCCACAACGGCATCGAGCGCAGCGGCTCCACCATCGCCATCAA GTTCGGCAGCCCCGACGACGCCGACCGCGCCCGCAGCCTGCTGGCCGACAGCGCGCGCGAACTGGCCTTCACGGTCGACA AGACTGCCGATGGCGCCACGCTTACGGGCACCTTTACCGACGCGGCCAAGAAGGAAGTCCAGGACAACGCGGTCAAGCAG AACGTCGTCACGCTGCACAACCGTGTGAATGAGCTCGGCGTGTCCGAGCCGGTGATCCAGCAGCAGGGCCCGGATCGCAT CGTGGTGCAGTTGCCCGGCGTGCAGGACACCGCCAAGGCCAAGGACATCATCGGCCGCACCGCGACGCTGGAAGCCCGCC TGGCCGACCCCAACGCCACCGGCATTCCGCGCGCGACCGATCCGGTGCCGCTGGGCGACGAGCTGTTCACACAAGGCCGC GGCGCGCCAGTGCTGCTGCAGAAGCAGGTGATCTTCACCGGCGACCGCATCAACAGCGCCTCGGCCGGTTTCGACCAGAA CCACAGCCCGTCGGTCGACATCACGCTCGACGGCCAGGGCGGCCGCATGCTGCGCGACGTCTCGCGCGACAACATCGGCA AGCGCATGGGCATCGTGCTGTTCGAGAAGGGCAAGGGCGAGGTGCTGACCGTCGCCACCATCCAGTCCGAACTGGGCTCG CGCTTCCAGATCACCGGCATCGGCACGGTGGAATCCGCATCCGACCTGGCGCTGCTGCTGCGCGCAGGCTCCCTGGCCGC ACCGATGGAGATCATCGAAGAACGCACCATCGGCCCGTCGCTGGGCGCCGACAACATCAAGAAGGGCTTCGATTCGGCCG CGTACGGCTTCGCCGCCATCTCGGTGTTCATGGTGCTGTACTACATGCTGTTCGGCCTGTTCTCGGTGGTGGCGCTGGGC GTGAACGTGTTCCTGCTGATCGCCATCCTGTCGATGCTGCAGGCCACCCTCACCCTGCCCGGCATCGCGGCCATCGCGCT GGCGCTGGGCATGGCGATCGACGCCAACGTGCTGATCAACGAACGCGTCCGCGAAGAGCTGCGCAACGGCGCCTCGCCGC AGATGGCGATCGCCGCCGGCTTCGAGCGCGCCTGGGCGACCATCCTGGACTCGAACGTGACCACGCTGATCGCCGGCCTG GCGCTGCTGGCCTTCGGCTCGGGCCCGGTGCGCGGCTTTGCCGTGGTGCACTGCCTGGGCATCCTCACGTCGATGTTCTC GGCGGTGTTCTTCAACCGCAGCCTGGTCAACCTCTGGTATGGCCGCAAGAAGAAGCTGCAGGGCCTCGCCATTGGCCAGG TGTGGAAACCCGCCGGCACCGAAAGTCCGGCCAAGCAGTAA Protein sequence : MNRYPLWKYLVILMALAIGFLYTLPNFFGEAPAVQVSSGKATVKVDLATQKQVESLLAAANLKPDGVFFDLNGTSGSVRV RFADTDTQLKAKDVLTHGLNNDPTDPTYIVALNLLSGSPRWLTSIHALPMFLGLDLRGGVHFLLQVDMNGALTKKLDSLA GDIRTQLRDKGIRHNGIERSGSTIAIKFGSPDDADRARSLLADSARELAFTVDKTADGATLTGTFTDAAKKEVQDNAVKQ NVVTLHNRVNELGVSEPVIQQQGPDRIVVQLPGVQDTAKAKDIIGRTATLEARLADPNATGIPRATDPVPLGDELFTQGR GAPVLLQKQVIFTGDRINSASAGFDQNHSPSVDITLDGQGGRMLRDVSRDNIGKRMGIVLFEKGKGEVLTVATIQSELGS RFQITGIGTVESASDLALLLRAGSLAAPMEIIEERTIGPSLGADNIKKGFDSAAYGFAAISVFMVLYYMLFGLFSVVALG VNVFLLIAILSMLQATLTLPGIAAIALALGMAIDANVLINERVREELRNGASPQMAIAAGFERAWATILDSNVTTLIAGL ALLAFGSGPVRGFAVVHCLGILTSMFSAVFFNRSLVNLWYGRKKKLQGLAIGQVWKPAGTESPAKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 5e-96 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-96 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-96 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-96 | 43 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 6e-96 | 43 |
