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Name : glcD (RPSI07_0849) Accession : YP_003751511.1 Strain : Ralstonia solanacearum PSI07 Genome accession: NC_014311 Putative virulence/resistance : Unknown Product : Glycolate oxidase subunit glcD Function : - COG functional category : C : Energy production and conversion COG ID : COG0277 EC number : 1.1.3.15 Position : 851156 - 852649 bp Length : 1494 bp Strand : - Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 8606183; Product type e : enzyme DNA sequence : ATGAACGCGCCGCTGCCCGCCGCCGCCCGCGATCCGTCAGCCGTGCAGGTCGAGCTGATCGCCGCGCTGTCGCCCCTGGT GCCCGCCGATGCCCTGCTGTGGGAGCGCGAAGACACCACCCCCTACGAATGCGACGGTCTCGCCGCCTACCGGCAGGTGC CGCTGGCCGTGGTGCTGCCGGACGACGAAGCGCAGGTGGTGGAGATCCTGCGCGCCTGCCACCGCCTGGGCGTGCCGGTG GTGCCGCGTGGCGCCGGCACCAGCCTGTCGGGCGGGGCGATGCCGACGCCGGGCGGACTGGTGCTGTCGCTGGCCAAGTT CAAGCGCATCCTGAAGCTCGATCCCACCACCCGCACGGCGATCGTGCAGCCGGGCGTGCGCAACTTGGCCATCTCGGAGG CCGCCGCACCGCACGGGCTGTACTACGCGCCCGATCCCTCGTCCCAGATCGCCTGCACCATCGGCGGCAACGTCAACGAG AATTCCGGCGGCGTGCATTGCCTGAAGTACGGCCTGACCGTGCACAACGTGCTGCGCGTGCGCGCCGTGATGATGGACGG CGAGGTGGTCGAGTTCGGCAGCGAGGCGCCCGACGCGCCCGGCCTGGACCTGCTCGCCGCCGTGATCGGCTCCGAAGGCA TGCTGGCCGTGGTGACGGAAGTGACCGTGCGGCTGGTCCCCAAGCCGCAGCTCGCGCAGGTCATCATGGCCAGCTTCGAC GATGTGGAAGCGGGCGGCAACGCGGTGGCCGATGTGATCGCCGCCGGCATCATCCCGGCCGGGCTGGAGATGATGGACAA ACCCGCCACCGCCGCCGTCGAAGAGTTCGTCTGCGCCGGCTACGACCTCGACGCCGCCGCCATCCTGCTGTGCGAATCCG ACGGCACGCCCGAAGAGGTGGCCGAGGAAATCGCCCGCATGAGCGAGGTGCTGCGCGCCTCCGGCGCCACCCGCATCCAG GTGTCGCAGAGCGAGGCCGAGCGGCTGAAATTCTGGAGCGGCCGCAAGAACGCCTTCCCGGCCGCCGGGCGCATCTCGCC GGACTACTACTGCATGGACGGCACCATCCCGCGCAAGCACATCGGCACGCTGCTCAAGCGCATCCAGCAGATGGAACGGA AGTACGCGCTGCGCTGCATCAACGTCTTCCATGCCGGCGACGGCAACATGCACCCGCTGATCCTCTTCAACGGCGAGGAC CGGGACGAATGGCACCGCGCCGAGCTGTTCGGCGCGGACATCCTCGAGACCTGCGTGGAGCTGGGCGGCACCGTCACCGG CGAGCATGGCGTGGGCGTCGAGAAGCTCAACTCGATGTGCGTGCAGTTCTCGGCCGAGGAGCGCGATGCCTTCCTGCGCG TCAAGGCCGCCTTCGACCCGGCGCGCCTGCTGAACCCCGACAAGGCCATCCCCACGCTCGCGCGCTGCGCCGAATACGGC AAGCTGCACGTGCGCAACGGCCTGCTGCCGCATCCCGACCTGCCGCGTTTCTGA Protein sequence : MNAPLPAAARDPSAVQVELIAALSPLVPADALLWEREDTTPYECDGLAAYRQVPLAVVLPDDEAQVVEILRACHRLGVPV VPRGAGTSLSGGAMPTPGGLVLSLAKFKRILKLDPTTRTAIVQPGVRNLAISEAAAPHGLYYAPDPSSQIACTIGGNVNE NSGGVHCLKYGLTVHNVLRVRAVMMDGEVVEFGSEAPDAPGLDLLAAVIGSEGMLAVVTEVTVRLVPKPQLAQVIMASFD DVEAGGNAVADVIAAGIIPAGLEMMDKPATAAVEEFVCAGYDLDAAAILLCESDGTPEEVAEEIARMSEVLRASGATRIQ VSQSEAERLKFWSGRKNAFPAAGRISPDYYCMDGTIPRKHIGTLLKRIQQMERKYALRCINVFHAGDGNMHPLILFNGED RDEWHRAELFGADILETCVELGGTVTGEHGVGVEKLNSMCVQFSAEERDAFLRVKAAFDPARLLNPDKAIPTLARCAEYG KLHVRNGLLPHPDLPRF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 6e-136 | 59 |
