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Name : Hden_1131 (Hden_1131) Accession : YP_003755266.1 Strain : Hyphomicrobium denitrificans ATCC 51888 Genome accession: NC_014313 Putative virulence/resistance : Unknown Product : cytochrome C biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1177510 - 1179492 bp Length : 1983 bp Strand : + Note : KEGG: sme:SMc02363 cytochrome C biogenesis transmembrane protein; TIGRFAM: cytochrome C biogenesis protein CcmF; PFAM: cytochrome C assembly protein DNA sequence : ATGATCATCGAGTTCGGACACTTCGCATTGATCCTGGCGCTGCTCGTCGCCGTGGTGCAGGTCGTCCTGCCGATGGCCGG CGCATCTCTCAAAGACGAACGTATGATGCGCGTCGCCGAGCCTGCCGCCGTCTCGCAGTTCATCCTGCTTGCGATCGCCT TCGTAGCGTTGATGCACGCTTATGTGACGTCGGACTTCTCGGTCGCGAACGTCGCGGAGAACTCGCATTCGACGAAGCCA CTGATCTACAAAATGGCCGGCGTCTGGGGCAATCACGAAGGCTCGATGCTGCTTTGGGTGCTGATCCTGGCCCTGTTCGG CGCTGCCGTCGCGCTGTTCGGCACGAACCTTCCGCCGAGCTTGCGCGCACGCGTTCTTTCGGTGCAGGCATCGATCGCCG TCGCGTTTCTGCTGTTCTCGATCCTGACGTCGAACCCGTTTCTGCGTCTCGTCCCGGCGCCATCCGACGGGCGCGGATTG AATCCGATCCTGCAAGACCCTGCGTTGGCGTTTCATCCGCCGTTTCTCTACACAGGCTACGTCGGCTTCTCGATCGCGTT TTCGTTTGCAATTGCCGCGCTGATCGAAGGCCGCATCGACGCCGCATGGGCGCGCTGGGTCAGGCCGTGGACGCTCGCCG CGTGGATGTTTCTGACGATCGGCATTTCGATGGGGTCGTGGTGGGCGTATTACGAACTCGGTTGGGGCGGCTGGTGGTTC TGGGACCCGGTCGAGAACGCGTCCTTCATGCCTTGGCTCGCGGGGACCGCGCTGCTGCATTCCGCGCTCGTGATGGAAAA ACGCGAAGCACTGAAAGTATGGACGGTGCTGCTCGCGATCCTGACGTTCTCTCTGTCTCTGATGGGGACGTTCATCGTGC GCTCCGGCGTGCTGACGTCGGTGCATTCGTTCGCGGTCGATCCAGCGCGCGGCGTGTTCATCCTCGCCATCCTGATTTTG TTCACGGGCGGCGGGCTGGCGCTATTTGCGTTGCGCGCGAGCGAGATGCAGACCGGTGGCATCTTCCAGCCGATCAGCCG CGAGGGCAGCCTCGTACTGAACAACCTGCTGCTTGTTACCGCGACCGCGACCGTTCTCGTCGGCACGCTTTATCCGATGG CGCTCGAAGGTCTGACGGGTGAGAAAATTTCGGTCGGTCCGCCGTTCTTTGATTCGACGTTCGGTCCGCTGATGATTCCG CTGCTGCTGGCGCTTCCCATCGGTCCGATGCTCGCGTGGAAACGCGGCGATCTCGCAGGTGTCATGCAGCGTTTGGCTTT CGCCGTGCTGGCCGCGATCATCGCGATCGTCGCCACCTATGCCGTGGGCCATCGCGGCCCGTGGCTGGCGCCGTTCGGCA TCGGTCTCGGCGTTTACGTGATGATGGGCGCGATTGCGGAATGGGCGAGCCGCATCAAGCTTGCTCAGGCGCCGGTGTCG GAAAGTTTCCGACGCGCTCGTAATCTCCCGCGCTCCGCCTACGGAACGCTGCTTGCGCATTTCGGCGTCGGCATGCTTGT CGTCGGCATCATCGCGACGAGCGCCTATCGCGAGGAACATATCCTCGTCATGAAGCCCGGCCAGACACTTTCAGTGGCTG GCTATGACGTGAAGTTCACAGGCTTCGAAAGCGGTCGCGGGCCGAACTATCGCGAAGACTTCGCGGACTTCGATGTCATG CGCAGCGGCACATCGATCGGACGTTTGCGTCCGTCAAAGCGGCTCTACGATGCTCCGCCGCAGCCGACAACGGAAGCCGG CATCCACGCGTCCTGGCGCGGCGATCTCTATCTCGTCATCGGCGATTCACAGCCGGATGGAGGCTACGCGGTGCGCGCGT ACTTCAATCCGCTGGTGCGCTTCATCTGGCTTGGTACGCTGATCATGTTCCTCGGCGGCGGCATTTCGCTTTCCGACCGG CGGCTGCGGATCGGCGTTCCGGCGGGTCGGGGACGGCGTGCGATCGCCGTTCCAGCGGAGTAA Protein sequence : MIIEFGHFALILALLVAVVQVVLPMAGASLKDERMMRVAEPAAVSQFILLAIAFVALMHAYVTSDFSVANVAENSHSTKP LIYKMAGVWGNHEGSMLLWVLILALFGAAVALFGTNLPPSLRARVLSVQASIAVAFLLFSILTSNPFLRLVPAPSDGRGL NPILQDPALAFHPPFLYTGYVGFSIAFSFAIAALIEGRIDAAWARWVRPWTLAAWMFLTIGISMGSWWAYYELGWGGWWF WDPVENASFMPWLAGTALLHSALVMEKREALKVWTVLLAILTFSLSLMGTFIVRSGVLTSVHSFAVDPARGVFILAILIL FTGGGLALFALRASEMQTGGIFQPISREGSLVLNNLLLVTATATVLVGTLYPMALEGLTGEKISVGPPFFDSTFGPLMIP LLLALPIGPMLAWKRGDLAGVMQRLAFAVLAAIIAIVATYAVGHRGPWLAPFGIGLGVYVMMGAIAEWASRIKLAQAPVS ESFRRARNLPRSAYGTLLAHFGVGMLVVGIIATSAYREEHILVMKPGQTLSVAGYDVKFTGFESGRGPNYREDFADFDVM RSGTSIGRLRPSKRLYDAPPQPTTEAGIHASWRGDLYLVIGDSQPDGGYAVRAYFNPLVRFIWLGTLIMFLGGGISLSDR RLRIGVPAGRGRRAIAVPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-106 | 49 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 4e-84 | 47 |
