|
Name : Hden_3270 (Hden_3270) Accession : YP_003757384.1 Strain : Hyphomicrobium denitrificans ATCC 51888 Genome accession: NC_014313 Putative virulence/resistance : Unknown Product : DNA polymerase III subunit epsilon Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0847 EC number : 2.7.7.7 Position : 3343474 - 3344187 bp Length : 714 bp Strand : - Note : SMART: exonuclease; TIGRFAM: DNA polymerase III epsilon subunit; KEGG: rpt:Rpal_0303 DNA polymerase III subunit epsilon; PFAM: exonuclease RNase T and DNA polymerase III DNA sequence : ATGCGCGAAATCGTGCTCGATACCGAAACGACGGGTCTCGATCCGAAAACCGGCGACCGCCTGATCGAAATCGGCGGCAT CGAGATCATCAATCGCATCCCGACAGGCGTCGAGTTTCACCGCTTCATCAATCCCGAACGCAATGTGCCGATGGAGGCGC AGAACGTCCACGGCATCTCGACCGAATTCCTGATCGGCAAGCCGCTGTTCCGCGAAGTCTATCGCGATTTCCTGGCGTTT ATCGGCGACGACATCCTCGTCATTCACAACGCTCAGTTCGACGTCAACTTCCTCAATCACGAGCTGGGTCTTGTCGGCGA GAAACCGCTGAGCTTCGATCGCGTCGTCGACACGCTGGCCTTGGCGCGCCGCCGTCATCCGGCCGGTCCGAACTCGCTCG ACGCGCTCTGCAAGCGTTACGGCATCGACACTTCCCAGCGCACGAAGCACGGCGCCATCGTCGACAGTCTGCTTCTCGCG GAAGTCTACGTTGAACTGCTTGGCGAGCGTCAGGCGACGTTCGGGCTGCAGACGATCGGCAGTGGCGCGGCGACCAGCGA ACGCCGTAACGGCAAACGCGCAGCCGCGAAGCAACGGCCCGAACCGCTGCCGTCCCGGCTGACCGAAGCGGACCTCGTCG CGCATCGCAGCTTCATCGAAAAGATGGGCGCGAAGGCGATCTGGAACCGCTTCTGGGGAGCGGTTACGTCCTGA Protein sequence : MREIVLDTETTGLDPKTGDRLIEIGGIEIINRIPTGVEFHRFINPERNVPMEAQNVHGISTEFLIGKPLFREVYRDFLAF IGDDILVIHNAQFDVNFLNHELGLVGEKPLSFDRVVDTLALARRRHPAGPNSLDALCKRYGIDTSQRTKHGAIVDSLLLA EVYVELLGERQATFGLQTIGSGAATSERRNGKRAAAKQRPEPLPSRLTEADLVAHRSFIEKMGAKAIWNRFWGAVTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaQ | AAO17223.1 | DnaQ | Not tested | tcd island | Protein | 5e-32 | 42 |
