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Name : Nwat_2196 (Nwat_2196) Accession : YP_003761349.1 Strain : Nitrosococcus watsonii C-113 Genome accession: NC_014315 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2392425 - 2394281 bp Length : 1857 bp Strand : - Note : KEGG: noc:Noc_2350 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein DNA sequence : ATGAACCGTTATCCTCTTTGGAAAAACCTGCTCGTAGTGGCAGTAGTGCTTGTTGGTATCCTTTATGCCGTGCCTAATCT ATTTGGCGATACCCCAGCTTTGCAGATTTCGGCGACTCGTGGCGCGAATCTCAAACCAGAGACTTTGGCCCGGGTGGAAC GGTTGCTCCAGGAGCAGGGTTTGGATTACCAATCGGTTCGCTTGGAAGATCAGCGCCTTTTGGTCCGCCTTCGCCGCTTG GAAACTCAACTCAAAGCTCAGGATGCTCTTAGGGCAGAATTGGGTTCCGACTATTCAATTGCTCTGCACTTGTCACCCGC TACCCCGGATTGGTTGCGGGCTATGGGGGGATTACCCATGAACCTGGGCTTGGATCTCCGTGGCGGGGTGCATTTTTTGA TGGAAGTGGATATGAAGGCCGCGGTCCAACAGGCTGAGGAGCGCTATGTGGAAGATCTGCGGACTTTATTGCGGGAGAAT AGAATTCGTTACCTCAGTATTGGGCGGTTGGGTGCTGGTGGAGTGGAGATTAAATTTCGTAATGAAGAGCAACGTGAGCG GGCAGAAACGCTCATCCACGATGAGTATTTCGATTTGTTGTTAGAATCGACAGAGGGGGAGCGATCTCCCCGTCTAGAAA TTAAGCTAAGCGAAAAGGAGCAGAGGGAAATCCAGCGCTTGGCTTTACAGCAAAATATGACCACTTTACGCAATCGAATC AATGAGCTCGGCGTGGCGGAACCCACTATTCAGCAGCAAGGTGAGAACCGCATTGTGGTGCAGCTGCCGGGTGTTCAGGA TACGGCTCGGGCCAAGGAGATTTTAGGGGCAACGGCAACTTTGGAATTTCGCCTAGTGGATACCAGCCACGATGTCCAGC GAGCGGTGGAAGGAAGAGTGCCAGTAGGATCACGCCTGTATTATGAGCGTGGTGGAGCTCCTATCTTGCTGAAGAAGCGA GTAATATTGACGGGTGATCATGTTACTGATGCCTCCTCGGGGATTGAGCAGCAAGGCGGTAGTCCAGCGGTGTTTGTCTC CCTAGATGGGCAAGGAGCCCGCCATTTCAGTCAAGTGACGGGAGAGAATATTGGCAAGCCCATGGCAGTGGTCTTTATAG AGACCAAGTCCGAGACCCGGATGGAGGGGGGGGAGCCAGTCAAGGTTCGCCGCCGGGTACCCGAGGTGATTAATGTAGCC ACCATTCGGGATCAACTCAGTAAACGTTTCCAGATTACGGGTCTTGATTCTACCGAGGAAGCCCGTAATTTAGCTTTGTT ATTGCGGGCAGGCGCACTGGCGGCGCCCATTGATATCGTTGAGGAACGGACCATCGGCCCAAGCCTGGGGCAGGATAATA TCGACAAGGGTTTTCAGTCCGTACTGATAGGGTTTGCCCTAGTACTGGTGTTTATGGCGCTTTATTATAGAGTTTTCGGG CTCGTTGCTGATTTGGCTTTGACCGCGAATCTAGTGCTGTTGGTCTCCCTTCTCTCTATGCTGCAAGCGACTCTGACTTT ACCAGGCATTGCCGGTATTGTACTCACAGTGGGTATGGCAGTTGATGCTAACGTATTGATTTTTGAGCGTATTCGCGAGG AACTTCGAAATGGTAGTAGCCCTCAGGCAAGTATCGAGGCAGGTTATGCCAATGCCTTATCGACCATTGTAGACGCCAAT ATCACTACCCTGATAACCGCGGTTGTCCTGTTTGGGTTTGGGACAGGTCCTATTAAGGGATTTGCGGTTACCTTATCCTT GGGTATTCTGACTTCCATGTTTACCGCTATTATGGGCACCCGAGCCGTGATTAATTTGATTTATGGGAAGCGGCGTAAGG TAAGGCTGGCTATCTAA Protein sequence : MNRYPLWKNLLVVAVVLVGILYAVPNLFGDTPALQISATRGANLKPETLARVERLLQEQGLDYQSVRLEDQRLLVRLRRL ETQLKAQDALRAELGSDYSIALHLSPATPDWLRAMGGLPMNLGLDLRGGVHFLMEVDMKAAVQQAEERYVEDLRTLLREN RIRYLSIGRLGAGGVEIKFRNEEQRERAETLIHDEYFDLLLESTEGERSPRLEIKLSEKEQREIQRLALQQNMTTLRNRI NELGVAEPTIQQQGENRIVVQLPGVQDTARAKEILGATATLEFRLVDTSHDVQRAVEGRVPVGSRLYYERGGAPILLKKR VILTGDHVTDASSGIEQQGGSPAVFVSLDGQGARHFSQVTGENIGKPMAVVFIETKSETRMEGGEPVKVRRRVPEVINVA TIRDQLSKRFQITGLDSTEEARNLALLLRAGALAAPIDIVEERTIGPSLGQDNIDKGFQSVLIGFALVLVFMALYYRVFG LVADLALTANLVLLVSLLSMLQATLTLPGIAGIVLTVGMAVDANVLIFERIREELRNGSSPQASIEAGYANALSTIVDAN ITTLITAVVLFGFGTGPIKGFAVTLSLGILTSMFTAIMGTRAVINLIYGKRRKVRLAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-106 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-106 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-106 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-106 | 47 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-106 | 47 |
