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Name : shiA (AMED_5231) Accession : YP_003767396.1 Strain : Amycolatopsis mediterranei U32 Genome accession: NC_014318 Putative virulence/resistance : Unknown Product : major facilitator superfamily transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2211 EC number : - Position : 5798567 - 5799874 bp Length : 1308 bp Strand : - Note : - DNA sequence : GTGAGCAGCCGCGCGGTCGCGGCCCGGCCCTTGCGGCGGGTCGCCGTGGCGAGCGCGGTGGGGACCACCATCGAGTGGTA CGACTACTTCATCTACAGCACGGCGACGGCGCTCGTGTTCGGCAAGCTGTTCTTCACGACGCTGTCGCCCGCTTCCGGGA CCCTGGCCGCGTTCGCGACGCTCGGGGTCGGGTTCCTGGCCCGCCCGGTCGGCGGGATCCTCTGGGGCCACTTCGGCGAT CGCGTGGGCCGCAAGGCGATGCTGGTGCTGTCACTGCTGCTGATGGGCGTGGCCACCGTCGGCGTCGGGCTGCTGCCGAC GTACTCCGCGATCGGGGTCTGGGCGCCCGTCCTGCTGCTCGTCCTGCGGCTGCTGCAGGGGCTGAGCGCGGGCGGCGAAT GGGGCGGGGCGGCGCTGATGGCGGTCGAGCACGCGCCCGAGGGGCGCCGCGGCCGGTACGGCGCGTTCTCGCAGATCGGC GTCCCGGCCGGATTGATCCTGGCGCAGCTGATGTTCTTCGTCCTCGGCCGCGCGCTGACCGACGCGCAGTTCGCCGCGTG GGGCTGGCGGGTGCCGTTCCTGGCGAGCATCGTGCTCGTCGGCATCGGCCTGGTGATCCGGCTGCGGATCGAGGAAAGCC CGGTGTTCTCCCGGTTGCGGGAGGCGGAGGAGCGCAGCAGCCGGCCGATGGTCGACGTGCTGCGCGAGCGGCCGCGGGCA CTGCTGGTGGCCTCCGGCAGCTTCATCGCCAACACCGCGATCGGGTACATCTTCCTGGCCTACCTGCTGTCCTACGGCAC CTCGGTGCTCAAGATCAACCGCACCACACTGCTCGTCGTGGTGATCGTGGGCAGCGTGACCTGGCTGGTGAGCATCCTCG CCTCGGCGGCGTGGTCCGACCGCGTGGGCCGCAAACCGGTGTACCTGGCCGGATCGGTGCTCCTGGTGGTCTGGCCGATC CCGTTCTTCCTGCTCGTCGACACGCGGGCGACGGCGTGGCTGATCGTGGCGGTGGTGGTGCTCAACATCGGCCTCGGGGC CACCTACGGGCCGCAGTCGGCGTTGTTCGCGGAGCTGTTCGAGCCGCGTTACCGCTACAGCGGGGCTTCGTTCTCCTACG CCGTCGGCGCGGTACTGGGCGGTGGCTTCGCGCCGTTGATCGCGACGGCGTTGCAGACCGCCACCGGCACTTCGCTTTCG GTGTCGCTCTACCTGGTGGCCGTGGCGGTGCTGAGCCTGGTCGCGGTGCTGTTCATCCCCCGGGATCAGAGCCGGTCGAG CCGGACGGCGGCGGCCATCCGCTCGTAG Protein sequence : MSSRAVAARPLRRVAVASAVGTTIEWYDYFIYSTATALVFGKLFFTTLSPASGTLAAFATLGVGFLARPVGGILWGHFGD RVGRKAMLVLSLLLMGVATVGVGLLPTYSAIGVWAPVLLLVLRLLQGLSAGGEWGGAALMAVEHAPEGRRGRYGAFSQIG VPAGLILAQLMFFVLGRALTDAQFAAWGWRVPFLASIVLVGIGLVIRLRIEESPVFSRLREAEERSSRPMVDVLRERPRA LLVASGSFIANTAIGYIFLAYLLSYGTSVLKINRTTLLVVVIVGSVTWLVSILASAAWSDRVGRKPVYLAGSVLLVVWPI PFFLLVDTRATAWLIVAVVVLNIGLGATYGPQSALFAELFEPRYRYSGASFSYAVGAVLGGGFAPLIATALQTATGTSLS VSLYLVAVAVLSLVAVLFIPRDQSRSSRTAAAIRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 3e-61 | 42 |
