Gene Information

Name : rnhA (AMED_6091)
Accession : YP_003768232.1
Strain : Amycolatopsis mediterranei U32
Genome accession: NC_014318
Putative virulence/resistance : Unknown
Product : ribonuclease HI
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : -
Position : 6746637 - 6747098 bp
Length : 462 bp
Strand : +
Note : -

DNA sequence :
GTGGACGTGGAGATCTACACCGACGGAGCGTGCAGCGGGAACCCCGGACCGGGCGGCTGGGGCGCGGTGCTGCGCTACGG
CAGGCACGAGCGCGAGCTGTACGGCGGCGAAGCCACGCCGACGACGAACAACCGCATGGAGCTGACGGCACCGATCCGCG
CCCTGGAGAGCCTGACCCGGCCGTCCCAGGTGCGCGTGTACACGGACAGCACGTACGTGCGCAACGGCATCACGCAGTGG
CTCCCCCGCTGGAAGAGCAACGGCTGGCAGACGACGGCGCGCGCCCCGGTGAAGAACGCGGACCTCTGGCAACGCCTCGA
CGCGGCGATCGGCGGCCACACGGTCGAGTGGCTCTGGGTCAAGGGCCACGCGGGACACCCGGAGAACGAGCGAGCGGACC
GGCTTGCGGTGCGGGGTGTGCAGGAGGCACGGGAACGCGGAAAGCCGGTCAACGCGGATTAG

Protein sequence :
MDVEIYTDGACSGNPGPGGWGAVLRYGRHERELYGGEATPTTNNRMELTAPIRALESLTRPSQVRVYTDSTYVRNGITQW
LPRWKSNGWQTTARAPVKNADLWQRLDAAIGGHTVEWLWVKGHAGHPENERADRLAVRGVQEARERGKPVNAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 9e-36 59