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Name : tktC (Hsero_1105) Accession : YP_003774530.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : transketolase, C-terminal subunit Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3958 EC number : 2.2.1.1 Position : 1255837 - 1256841 bp Length : 1005 bp Strand : - Note : - DNA sequence : ATGAACACCGTCGCAGACAAGAAACCGCGCCTGACCACCTCGGCCATGATCGCCTCCATCGCCGCCGAGGGGCAGCGCGT GCAGGCGGCCCCGTTCGGCAAGGCGCTGGTGGACTATGCCGCCGACCGTCCCGAGATCGTCGGCCTGACCGCCGACCTGG CCAAGTACACCGACCTGCACCTGTTCCAGAAGGCCTATCCCGAGCGCTTCTTCCAGATGGGCATGGCCGAACAGTTGCTC ATGGCCGCCGCCGGCGGCATGGCCAAGGAAGGGCTGGTGCCTTTCGCCACCACCTATGCGGTCTTCGCCACCCGGCGCGC CTATGACTTCATCCACCAGGTGATTGCCGAAGAAAACCTGAACGTGAAGATCTGCTGCGCCCTGCCGGGCCTGACCACCG GCTACGGCCCCAGCCACCAGGCCACCGAAGACCTGGCGATGATGCGCGCCATCCCCGGCATGACCATCGTCGACCCCTGC GATGCGCTGGACCTGGAACAGGCCGTGCCGCAGATCGCCGCGCACCAGGGTCCGGTCTACATGCGCCTGGCGCGCGGCAA TGTGCCGCTGGTGCTGGATGAATACGACTACCGGTTCGAGCTGGGTCGCGCCAAGGAAATCCGCGACGGCAATGATGTGC TGATCATCTCCAGCGGCTTCATGACCATGCGCGCGCTGGAAGTGGCCAAGGCGCTGGAAGCCGACAAGGTGAGCGTGGCC GTGCTGCACTGCCCGACCATCAAGCCCTTCGACGAAGCCACGGTAGTGGCGCAGGTCAAGAAGAAGAACCGTCTGGTGGT GGTGGCCGAGAACCATTCGGTGGTCGGCGGCCTGGGCGAGATCGTCGCCACCACGCTGATGCGCCACCGCGTGCAGCCGG CCGGCTTCCAGCTGGCCGGCCTGCCGGACGCCTTCCTGGACGCCGGCGCGCTGCCGACCTTGCATGATCGTTATGGGATC AGTTGCGAGGTGTTGGGAAGGCGGATCAAGGAGTGGTTGAAGTAA Protein sequence : MNTVADKKPRLTTSAMIASIAAEGQRVQAAPFGKALVDYAADRPEIVGLTADLAKYTDLHLFQKAYPERFFQMGMAEQLL MAAAGGMAKEGLVPFATTYAVFATRRAYDFIHQVIAEENLNVKICCALPGLTTGYGPSHQATEDLAMMRAIPGMTIVDPC DALDLEQAVPQIAAHQGPVYMRLARGNVPLVLDEYDYRFELGRAKEIRDGNDVLIISSGFMTMRALEVAKALEADKVSVA VLHCPTIKPFDEATVVAQVKKKNRLVVVAENHSVVGGLGEIVATTLMRHRVQPAGFQLAGLPDAFLDAGALPTLHDRYGI SCEVLGRRIKEWLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96230.1 | transketolase | Not tested | T-PAI | Protein | 1e-87 | 76 |
| unnamed | AAT96118.1 | transketolase | Not tested | T-PAI | Protein | 1e-99 | 75 |
| unnamed | AAT96057.1 | transketolase | Not tested | T-PAI | Protein | 5e-114 | 73 |
| unnamed | AAT96101.1 | transketolase | Not tested | T-PAI | Protein | 2e-114 | 73 |
