Gene Information

Name : tktB (Hsero_1106)
Accession : YP_003774531.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3959
EC number : 2.2.1.1
Position : 1256838 - 1257683 bp
Length : 846 bp
Strand : -
Note : -

DNA sequence : 
ATGTCTGACAATTTGGCAAACCTGCGCGCCAGCGCATACCGCATCCGCCGCAATGCCGTGCGCATGGGCGAGGTCCAGGG
CCAGGGCTACATCGGCCAGGCGCTGGGCTGGGCCGACGTGCTGGCCGTGGCCTACAAGCACGCCATGAGCCTGCGCCCGG
ACGACCCGCAGTGGAGCGGCCGCGACCGCTTCCTGCTCTCGCACGGCCACTACGCCATCGCCTTGTATGCCGCGCTGATC
GAAGCCGGCATCGTCCCCGACGAAGAGCTGGACTCCTATGGCAGCGATGACAGCCGCCTGCCCATGTCGGGCATGGCCAC
CTATACGCCGGGCATGGAAATCTCCGGCGGCTCGCTGGGCCAGGGCCTGGCCATCGGCGTGGGCATGGCGCTGGGCCTGC
GTTACAACAACAACCCGGCCTTTGTGTACAACTCCATGTCCGATGGCGAGCTGGATGAAGGCTCGACCTGGGAAGCCGCC
ATGGGCGCGGCGCATCACCAGCTGGGCAATCTGATCTGCCTGGTCGATATCAACAACCAGCAGGCCGATGGCCCCTCCGG
CAAGATCATGGGCTTCGAGCCGCTGGCCGACAAATGGGCGGCCTTTGGCTGGTATGTGCAGCGCGTCGATGGCAACGACC
TGGCCGCCGTAGTGCAGGCCTTCGACAACGCCCGCAACCTGAAGGACGCCAAGCCGCGCGTGATCCTGTTCGACACCCTG
ATGGGCAAGGGGGTGCCTTTCCTGGAGCAGCGCGAGAAGAACCACTTCATCCGTGTCGATCCGCCCGAATGGCAGCAGGC
GCTGTCCATCCTCGACCAGTCTTATCAACAAGGAAGCCAAGCATGA

Protein sequence : 
MSDNLANLRASAYRIRRNAVRMGEVQGQGYIGQALGWADVLAVAYKHAMSLRPDDPQWSGRDRFLLSHGHYAIALYAALI
EAGIVPDEELDSYGSDDSRLPMSGMATYTPGMEISGGSLGQGLAIGVGMALGLRYNNNPAFVYNSMSDGELDEGSTWEAA
MGAAHHQLGNLICLVDINNQQADGPSGKIMGFEPLADKWAAFGWYVQRVDGNDLAAVVQAFDNARNLKDAKPRVILFDTL
MGKGVPFLEQREKNHFIRVDPPEWQQALSILDQSYQQGSQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 4e-78 67
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 3e-78 67
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 2e-78 67
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 7e-78 66
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 4e-78 66