|
Name : tgt (Hsero_1229) Accession : YP_003774653.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Unknown Product : queuine tRNA-ribosyltransferase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0343 EC number : 2.4.2.29 Position : 1389057 - 1390187 bp Length : 1131 bp Strand : + Note : - DNA sequence : ATGCTGGAATTCACCCTGCTGAAAACCGACGGAAAGGCCCGCCGCGGCCGCGTCAAACTGAACCACGGCACCGTCGAGAC GCCCATCTTCATGCCGGTGGGCACCTATGGTTCGGTCAAGGCCATGTCGCCGCTGGAACTGAAGGAGATCAACGCCCAGA TCATCCTCGGCAATACCTTCCACCTGTGGCTGCGCCCGGGCCTGGAAGTGGTCAGCAGGTTCGGCGGCCTGCACAAGTTC ATCGGCTGGGACAAGCCCATCCTGACCGACTCCGGCGGCTTCCAGGTGTTTTCGCTGGGAGAGATGCGCAAGATCACCGA AGAGGGCGTGCATTTCGCCTCGCCCATCAACGGCGACCGCCTGTTCCTCTCGCCGGAAATCTCCATGCAGATCCAGCGCG TGCTCAATTCCGACATCGTCATGCAGTTCGACGAATGCACCCCCTACGAGATCGATGGCCGCCCCGCCACCCGTGAAGAA GCCGGCAAGTCCATGCGCATGTCGCTGCGCTGGGCCAAGCGTTCCAAGGATGAATTCGATCGTGGCGAGAATCCGAACGC GCTCTTCGGCATCGTCCAGGGCGGCATGTTCGAAGGCCTGCGCGATGAATCGCTGGCCGGGCTGGAAGAATTGGGCTTCG ACGGTTTCGCCATCGGCGGCCTGTCGGTAGGCGAGCCCAAGGAAGACATGATGCGCGTGCTGGAACACGTGGGCCCGCGC CTGCCGGCCGACAAGCCGCACTACCTGATGGGCGTGGGTACGCCGGAAGACCTGGTGGAGGGTGTGGCCAATGGCGTGGA CATGTTCGATTGCGTCATGCCCACCCGCAATGCCCGCAACGGCTGGATCTTCACCCGCTACGGCGACGTCAAGATCAAGA ACGCCAAGTACAAGAACGATGACCGTCCCTTCGACGAGAGCTGCGACTGCTACGCCTGCAAGAACTTCTCGCGGGCCTAC CTGCATCACCTGCATCGCGCCGGCGAAATCCTGGGCGCGCGCATGAATACCGTGCACAACCTGCACTACTACCTGCAATT GATGCAGGAGATGCGCGACGCCATCGACGCCGGCACCTTCCAAGACTTCGTGAAGAAATTCAAGGAAGACCGCGCCCGCG GCGTGGACTGA Protein sequence : MLEFTLLKTDGKARRGRVKLNHGTVETPIFMPVGTYGSVKAMSPLELKEINAQIILGNTFHLWLRPGLEVVSRFGGLHKF IGWDKPILTDSGGFQVFSLGEMRKITEEGVHFASPINGDRLFLSPEISMQIQRVLNSDIVMQFDECTPYEIDGRPATREE AGKSMRMSLRWAKRSKDEFDRGENPNALFGIVQGGMFEGLRDESLAGLEELGFDGFAIGGLSVGEPKEDMMRVLEHVGPR LPADKPHYLMGVGTPEDLVEGVANGVDMFDCVMPTRNARNGWIFTRYGDVKIKNAKYKNDDRPFDESCDCYACKNFSRAY LHHLHRAGEILGARMNTVHNLHYYLQLMQEMRDAIDAGTFQDFVKKFKEDRARGVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tgt | AAT96069.1 | Tgt | Not tested | T-PAI | Protein | 7e-115 | 64 |
| tgt | AAT96181.1 | Tgt | Not tested | T-PAI | Protein | 7e-115 | 64 |
| tgt | AAT96041.1 | Tgt | Not tested | T-PAI | Protein | 5e-115 | 64 |
| tgt | AAT96105.1 | Tgt | Not tested | T-PAI | Protein | 5e-115 | 64 |
| tgt | AAT96121.1 | Tgt | Not tested | T-PAI | Protein | 5e-115 | 64 |
