Gene Information

Name : fecA (Hsero_1277)
Accession : YP_003774701.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Virulence
Product : outer membrane Iron(III) dicitrate transport protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG4772
EC number : -
Position : 1446854 - 1448965 bp
Length : 2112 bp
Strand : +
Note : -

DNA sequence :
ATGAAGACCCATCAAGCCCCCTCGCTCTTTGTGCGCGACCTGCGTATCACCACGACCGCTCTTGCCTCGCTGGCGATACT
GGCTTTTCCCGTAGCAGGCCTGGCCCAGCAGGCAAGCCCATCGGATGGACAACCCGGCCTGGAGCCCATACAGGTCAGCG
GAGACTGGCTTGGCACTGGCCTGGAGAGTAGCGTTAAGACTTATCCGGGAGCGCGCACCGTGGTGAAGAAGCAGGAGATC
GAAAGCACCGGCGCTGTCAGTATCGGTGACGCGATGCGCCGCATTCCCGGTGTGCAGTCCAGCGACAACTCTGGCACCGC
TGGCAGCGCCATCGCGCTCAACATCGGTGTGCGCGGGCTGGCCGGGCGCTATTCACCGCGCTCCACCATCCTGCTGGACG
GCATTCCCATGGCGGTGGCGCCCTATGGTCAGCCGCAACTATCGTTCGCACCACTGAGCCTGAACAATATTGAATCGATC
GACGTCGTCCGTGGTGGCGGGGCCGTGCGCTTCGGTCCGCAGAACGTGGGCGGCATCATCAATTTCAAGACGCGCTCCAT
CCCGACGACGCCCGGCATTTCCGGCGACGCTGCGGTGCGCTACAACAGTTACGGCCAGGGCGGCGGCAATACGCAGTACA
CCGCCTTTGCCGGCGGTCAGGCGGAGAACGGCTTCGGCATGGCCTTCCTCTATTCCGGCCAGGAAGGAAGTGGTTGGCGC
GACAAGAGCGATGAGCACCTCAATGATTTTGCGCTGAAGATGCGTTACGAGATTTCGCCGACCTCCGAGCTCTACGCCAA
GATCAACTACTATGACGTGCTCAGCCGCACGCCCGGCGGGCTCAGCGTTGCCCAATACGCCGCCGACCCGTTCCAGAGCA
CACGCCAGCGCGACAATTGGGGTGGAACCCGCAAAGGCTTTGATGTGGGCTATCTCAACACGATATCGGATCGCCAGGAA
TTCGAGATCCGTACCTACTTCAGCCAGGCTACCCGCCAGAGCACGTTGATCAATCCGGCCGGCACTCGCCTCTCGCATCA
ACCGCGCAACTATGAAACGCTGGGCATCGAGCCGCGCTACACGCAGCGCTTTGCATGGGGCGGTACCACGCACGATGTCA
CCGTGGGCTATCGCTATGTCCGTGAGCGCGGCGATGACAATGTCTATAGCGAAGCCGTCCTCACTGGCGTGCTCAGTGGA
TTCACCCAGTTCCAGAACAGCACCGATGCCCATGCCGGCTACATCGATGACAAGATCGCCTTCGGCAAATGGCGCATTAC
GCCGGGCCTGCGTTTCGAGCATGTCCAGTCGACCCGCTATGACGTAGCCAATAACGCTTCCTACCAGGTGTCCAACAACA
AGCCGCTGCCCTCGATCAATGTGGCCTACCTGCTTACCGAGCAGTTGACCTTGTTCAGCAACTACAACACTTCCTTCGGT
GTGGTTCAGAATTCGCAACTCAACACCATGTCATCGGCCAATCCGCTCTCGCCCGAGCTGGCCAAGACGATCGAAGGAGG
GGTGCGCTGGAAGAGCGCGCGGGCATCTGCAGAAGCGACGGTGTTCCATATCGATTTCGACAACCAGATCGTCTCCGTCC
AGGGTACGAATCCAAGCGTCTTCCGCAACATCGGCAAGACCCAGCATGACGGTATCGAACTGGCGATGGACTATGCCTTT
GATCAGCAGAGTGTCTTGAAGGGATGGTCGGTCTACGCCAACTACACCTACACCCGCGCCTTGCAGAAGTCGGGTGCAAA
TCCGGGCAAGGACTTGCCGTTCTATGCCCGCACTACCGACACAGTGGGCACGCGCTTCAAATCGGGACCGTGGGGTTTCA
ATCTGTCGACCACCCATCAAGGCCGTCAATTTTCCGATGAAGCCAACACCATCGCCGAAAGCGCCGACGGCAGCATCGGG
GAAATCCCTGGTTTCCGCCTCTGGAATGCCCAGGTGGATTGGAAAGTGCCGGGCACGAAGGGCTTTGATGTCTTTGCCGG
CATCAATAACCTGACCGACCGTCGCTATTTCACTCGGACCACCGATAACAACCTGGGCAAGCTGGTGGGCGCACCGCGTA
CCGTCTATGTGCAGGGGCGTTATTCATTCTGA

Protein sequence :
MKTHQAPSLFVRDLRITTTALASLAILAFPVAGLAQQASPSDGQPGLEPIQVSGDWLGTGLESSVKTYPGARTVVKKQEI
ESTGAVSIGDAMRRIPGVQSSDNSGTAGSAIALNIGVRGLAGRYSPRSTILLDGIPMAVAPYGQPQLSFAPLSLNNIESI
DVVRGGGAVRFGPQNVGGIINFKTRSIPTTPGISGDAAVRYNSYGQGGGNTQYTAFAGGQAENGFGMAFLYSGQEGSGWR
DKSDEHLNDFALKMRYEISPTSELYAKINYYDVLSRTPGGLSVAQYAADPFQSTRQRDNWGGTRKGFDVGYLNTISDRQE
FEIRTYFSQATRQSTLINPAGTRLSHQPRNYETLGIEPRYTQRFAWGGTTHDVTVGYRYVRERGDDNVYSEAVLTGVLSG
FTQFQNSTDAHAGYIDDKIAFGKWRITPGLRFEHVQSTRYDVANNASYQVSNNKPLPSINVAYLLTEQLTLFSNYNTSFG
VVQNSQLNTMSSANPLSPELAKTIEGGVRWKSARASAEATVFHIDFDNQIVSVQGTNPSVFRNIGKTQHDGIELAMDYAF
DQQSVLKGWSVYANYTYTRALQKSGANPGKDLPFYARTTDTVGTRFKSGPWGFNLSTTHQGRQFSDEANTIAESADGSIG
EIPGFRLWNAQVDWKVPGTKGFDVFAGINNLTDRRYFTRTTDNNLGKLVGAPRTVYVQGRYSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 6e-114 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecA YP_003774701.1 outer membrane Iron(III) dicitrate transport protein VFG1047 Protein 4e-114 43