Gene Information

Name : fecI (Hsero_2433)
Accession : YP_003775840.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma-70 factor, ECF subfamily (sigma-24) transcription regulator protein
Function : -
COG functional category : K : Transcription
COG ID : COG1595
EC number : -
Position : 2762491 - 2763015 bp
Length : 525 bp
Strand : -
Note : -

DNA sequence : 
ATGCCAGTGCCGCACACCGTCCATGCCCAGCGCTTCCATACGCTCTACAGCGAGCACCATGGCTGGCTGCAGCAATGGCT
GCGACGACGCGTGGGCAGCAGTTTCGACGCCGCCGACCTGGCCCAGGACACCTTCCTGCGCGTGCTGGGCAAGCCGGGCG
CGCTGGATGGAGTGCGCGAGCCGCGCGCCTGGCTCAGCCGCATTGCCCATGGCCTGGTGGTGGACAAGCTGCGCCGGGAA
GAGGTCGAGCGCACCTGCCTGGAAGCCATTGCCCATCTGCCCGAGCCGGAAGTGGTCTCGCCGGAAGCGCGGCTGATCCT
GGTGGAGGCCTTGTGCATGATCGACGCCCTGCTCGAAGGACTGGGTGAACGCGCTCGCCAGGCTTTCCTGCTCTCGCGGC
TGGACGAGATGAGCTATCCGGAAATCGCCCGTCACCTGGGCGTATCGCTGAGCAGCGTGGAAAAATACATGGCCGCGGCG
ATCCGCCATTGCTACCTGATGCGGCAGTCCCTGCAGGCGGCCTGA

Protein sequence : 
MPVPHTVHAQRFHTLYSEHHGWLQQWLRRRVGSSFDAADLAQDTFLRVLGKPGALDGVREPRAWLSRIAHGLVVDKLRRE
EVERTCLEAIAHLPEPEVVSPEARLILVEALCMIDALLEGLGERARQAFLLSRLDEMSYPEIARHLGVSLSSVEKYMAAA
IRHCYLMRQSLQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08458.1 FecI Virulence SRL Protein 1e-37 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecI YP_003775840.1 RNA polymerase sigma-70 factor, ECF subfamily (sigma-24) transcription regulator protein VFG1049 Protein 6e-38 48