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Name : cyaB (Hsero_2881) Accession : YP_003776281.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Virulence Product : bacteriocin/lantibiotic (cyclolysin-type) secretion ABC transporter protein Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 3273870 - 3276050 bp Length : 2181 bp Strand : - Note : - DNA sequence : ATGAACGAGACCGACAAGGACCATCCGCCCGCTGACATCGACAGCGGCCTGCAGTGCCTGATGATGATGGCCAGGCTGCA TGGCATTGCCGCCGATGCGCAGCAATTGCAGCATCGCTTCGGCCGCCAGCCCTTCGAGATGCAGACCATCTTGCTGGCTG CACGGGTGCTGGGCATGACCGCCAAGTGCCTGCACCAGCAGCGCGAACGGCTTGAACGCACGCCGCTGCCGGCGATCGGG ATTGATCGCAATGGCCGCTTCTTCGTGCTGGCCAAGGTCGAGCAGGCCCAGGGCGAGAGCGCGCACGGCCAGCGCATCCT GGTGCAGCAGCCGGGACAGGCGCCGCAGGTGCTCTCGCAGCGGGACTTCGAGGCGCTCTGGTCGGGCCAGGTGATCCTCT TCACCAGCAAGGCCAGCTACGCGCAGGAGTCCTCGCGCTTCGACTTCTCCTGGTTCATTCCCGCTGTGGTGAAGTACCGC AAGACCCTGGCCGAGGTCTTGCTCATTTCCCTGGTGCTGCAACTGATCGGCCTGATCACGCCGATGTTCTTCCAGGTGGT GATGGACAAGGTGCTGGTCAACCACGCCATGATGACGCTCAATGTCATCGCCGTCGGCTTGATCGCCGCCACCGTCTTCG AGGCCGTGCTGACAGGTATTCGCACGGCCATCTTCGCCAACGCCAGCAGCAAGATCGATGTCGAGCTGGGCTCGCGCCTG TTCAGCCATCTGCTGAGCCTGCCCCTGAGCTACTTCCAGGTACGCCGCGCCGGTGACTCCATTGCCCGCGTGCGCGAGCT GGAAAACATCCGCAGCTTCCTCACCGGCAATGCCATGACGCTGGTGCTGGACATCATGTTTTCCTTCGTCTTCCTGGGCG TGATGCTGTGGTACAGCGTGAGCCTGAGCCTGATCGTGCTGGCTTCCATTCCGGTGTATGTGCTGCTCTCGCTGGTCTTT ACGCCGCTCTTGCGCGAGCGCCTCAACGACAAGTTCAACAAGAGCGCCGAGAACCAGTCCTTCCTGGTCGAGACCCTGAC CGGCATGGATACCGTGAAAGCCATGGCGGTGGAGCCGCGCTGGCAGCAGAAGTGGGACAAGCAGCTGGCCGCCTATGTCG CCGCCGGCCTGACCACGACCAACATCAGCCTCTTGGCCAGCGGTGCAGTGGGACTGGTGAGCAAGCTGGTGACGGTGGGC ATCATGTGGCTGGGGGCGCTGCTGGTGGTCAAGAACGAGATGTCGGTGGGCGAGCTGGTGGCCTTCAACATGCTGGCCGG CCAGGTGGCCTCGCCCATCCTGCGGCTGGCGCAACTGTGGAACGACTTCCAGCAGATCGGCATTTCCATGAGCCGGCTGG CCGACGTGCTCGATGCGCGCACCGAGGTGGCGGGCAACCGCACCCGCTTGCCGCGTGTCAATGGCGCAATCAGTTTCGAC CTGGTGTCATTCCGCTATCGCCCCGAAACGCCGGAGGTGATTCGCGGGCTGTCGCTGCAGATCAGGCCGGGGGAGGTGAT CGGCATCGTCGGCCGCTCCGGCTCCGGCAAGAGCACCCTGGCCAAGCTGGTGCAGCGTCTCTACATCTGCGAGACCGGGC GCATCAGCGTGGATGGGCAGGATATCGCCATCATCGATACCGCCTCGCTGCGCCAGCAGATCGGCGTGGTGCTGCAGGAG AACACGTTGTTCTCGCGCTCCATCCGCGACAACATCGCCCTGGCCGATCCCTCCACGCCCATCGAGCAGATCATCGAGGC GGCCAAGCTGGCCGGCGCCCACGACTTCATCTGCGAACTGCCCGAGGGCTACGACACCATGGTGGGCGAGCAGGGCAGCG GCCTCTCCGGCGGCCAGCGCCAGCGCATCGCCATTGCGCGTGCGCTCATCACCAATCCCGGCATCCTCATCTTCGACGAA GCCACCAGCGCCCTGGACTATGAATCGGAAAAGATCATCCAGGACAACATGCGCCAGATCTGCGCCGGCCGCACCGTGTT GATCATCGCCCACCGGCTCTCGGCAGTGCGCGATGCCGATCGCATCATCGTCATGGAACGCGGTCGCGTGGCCGAGAGCG GCAGCCATGATGAACTGATCGACCTGCCCGGCGGCATCTACGCCCATCTGCACCGGCTCCAGGCCGGTCACGCGGGCCTC ATCGAGGAGAGAACGGCATGA Protein sequence : MNETDKDHPPADIDSGLQCLMMMARLHGIAADAQQLQHRFGRQPFEMQTILLAARVLGMTAKCLHQQRERLERTPLPAIG IDRNGRFFVLAKVEQAQGESAHGQRILVQQPGQAPQVLSQRDFEALWSGQVILFTSKASYAQESSRFDFSWFIPAVVKYR KTLAEVLLISLVLQLIGLITPMFFQVVMDKVLVNHAMMTLNVIAVGLIAATVFEAVLTGIRTAIFANASSKIDVELGSRL FSHLLSLPLSYFQVRRAGDSIARVRELENIRSFLTGNAMTLVLDIMFSFVFLGVMLWYSVSLSLIVLASIPVYVLLSLVF TPLLRERLNDKFNKSAENQSFLVETLTGMDTVKAMAVEPRWQQKWDKQLAAYVAAGLTTTNISLLASGAVGLVSKLVTVG IMWLGALLVVKNEMSVGELVAFNMLAGQVASPILRLAQLWNDFQQIGISMSRLADVLDARTEVAGNRTRLPRVNGAISFD LVSFRYRPETPEVIRGLSLQIRPGEVIGIVGRSGSGKSTLAKLVQRLYICETGRISVDGQDIAIIDTASLRQQIGVVLQE NTLFSRSIRDNIALADPSTPIEQIIEAAKLAGAHDFICELPEGYDTMVGEQGSGLSGGQRQRIAIARALITNPGILIFDE ATSALDYESEKIIQDNMRQICAGRTVLIIAHRLSAVRDADRIIVMERGRVAESGSHDELIDLPGGIYAHLHRLQAGHAGL IEERTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 7e-177 | 54 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 6e-177 | 54 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 6e-177 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cyaB | YP_003776281.1 | bacteriocin/lantibiotic (cyclolysin-type) secretion ABC transporter protein | VFG1269 | Protein | 0.0 | 64 |
| cyaB | YP_003776281.1 | bacteriocin/lantibiotic (cyclolysin-type) secretion ABC transporter protein | VFG1557 | Protein | 3e-177 | 54 |
| cyaB | YP_003776281.1 | bacteriocin/lantibiotic (cyclolysin-type) secretion ABC transporter protein | VFG1501 | Protein | 3e-177 | 54 |
| cyaB | YP_003776281.1 | bacteriocin/lantibiotic (cyclolysin-type) secretion ABC transporter protein | VFG0907 | Protein | 3e-177 | 54 |
| cyaB | YP_003776281.1 | bacteriocin/lantibiotic (cyclolysin-type) secretion ABC transporter protein | VFG0841 | Protein | 1e-166 | 54 |
