Gene Information

Name : rnhA (Hsero_3416)
Accession : YP_003776804.1
Strain : Herbaspirillum seropedicae SmR1
Genome accession: NC_014323
Putative virulence/resistance : Unknown
Product : ribonuclease HI protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 3917287 - 3917718 bp
Length : 432 bp
Strand : -
Note : -

DNA sequence :
ATGGACAAAGTAGAGATTTATTCCGATGGCGCCTGCAAGGGCAACCCTGGCCGTGGCGGCTGGGGCGCTTTGCTGGTAGC
CGGCGGCAAGGAAAAGGAAATCTTCGGCGGCGAGCCCAACACCACCAACAACCGCATGGAACTGATGGCGGTGATTCAGG
CCCTCAATGCCCTCAAGCGCCCCTGCGAAGTGGTGGTGCATACCGACAGCCAGTATGTGCAGAAGGGCATCAGCGAGTGG
ATCCACGGCTGGAAGGCCCGTGGCTGGAAGACCGCCAGCAAGGAGCCGGTCAAGAATGCCGACCTCTGGCAGGCGCTGGA
CGCCGCCCAGCAGCAGCATCAGGTAGAGTGGCGCTGGGTGCGCGGTCACAACGGCCACGCCGGCAACGAGCGCGCCGACC
AGTTGGCCAATCGCGGCGTGGAAAGTATTTAA

Protein sequence :
MDKVEIYSDGACKGNPGRGGWGALLVAGGKEKEIFGGEPNTTNNRMELMAVIQALNALKRPCEVVVHTDSQYVQKGISEW
IHGWKARGWKTASKEPVKNADLWQALDAAQQQHQVEWRWVRGHNGHAGNERADQLANRGVESI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 6e-30 55