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Name : fecI (Hsero_0035) Accession : YP_003773473.1 Strain : Herbaspirillum seropedicae SmR1 Genome accession: NC_014323 Putative virulence/resistance : Virulence Product : RNA polymerase sigma-70 factor protein Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 47614 - 48159 bp Length : 546 bp Strand : - Note : ECF subfamily (sigma-24) transcription regulator DNA sequence : TTGCAGCCTTTGCCTGCCCTTCTGCCTACTTGTCCAGGGATGCCGGTTCCCATGTCTATCGAAGCCCTCTATTGCGACCA CCATTCCTGGCTCAAGGGATGGCTGCAACGTCGTCTCGGCAATAGCGAGCAGGCGGCGGACCTGGCCCAGGACACCTTCC TGCGGCTGCTGGGCAGCGAGCGTGTGCCCAGCGTGATCCACGAGCCGCGCGCCTACCTGACCACGGTGGCGCAACGGCTG GTATCGAACCTGTGGCGCCGCGAGAAACTGGAGCAGGCCTACCTGGAGGCGCTGGCGCAGGCCCCGGTGGCGCTGGCGCC CTCGCCGCAGGAGCAGGCCATCCTGCTGGAAACCCTGCTGGAGCTGGACCAGCTGCTCGACGAGCTGCCTTCCATCGTGC GCCGCGCTTTCCTGCTCTCGCAGCTCGACGGCCTGACCCACGCCCAGGTCGCAGCCGCCCTGGGCATTTCCATTCCGACG GTGAAACGCTACCTGGTCAAGGCCTTGCAGCGCTGCTATTTCGCCGACATCTCCTTCAGCGCCTGA Protein sequence : MQPLPALLPTCPGMPVPMSIEALYCDHHSWLKGWLQRRLGNSEQAADLAQDTFLRLLGSERVPSVIHEPRAYLTTVAQRL VSNLWRREKLEQAYLEALAQAPVALAPSPQEQAILLETLLELDQLLDELPSIVRRAFLLSQLDGLTHAQVAAALGISIPT VKRYLVKALQRCYFADISFSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 1e-26 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fecI | YP_003773473.1 | RNA polymerase sigma-70 factor protein | VFG1049 | Protein | 6e-27 | 46 |
