Gene Information

Name : CLJU_c11960 (CLJU_c11960)
Accession : YP_003779366.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Virulence
Product : acetaldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.-
Position : 1295679 - 1297232 bp
Length : 1554 bp
Strand : +
Note : -

DNA sequence :
TTGGAAAATTTTGATAAAGACTTACGTTCTATACAAGAAGCAAGAGATCTTGCACGTTTAGGAAAAATTGCAGCAGACCA
AATTGCTGATTATACTGAAGAACAAATTGATAAAATCCTATGTAATATGGTTAGGGTAGCAGAAGAAAATGCAGTTTGCC
TTGGTAAAATGGCTGCAGAAGAAACTGGTTTTGGAAAAGCTGAAGATAAGGCTTATAAGAACCATATGGCTGCTACTACA
GTATATAATTACATCAAGGATATGAAGACTATTGGTGTTATAAAAGAAGATAAAAGTGAAGGTGTAATTGAATTTGCAGA
ACCAGTTGGTTTATTAATGGGTATTGTACCATCTACAAATCCAACATCTACTGTTATTTATAAATCAATCATTGCAATTA
AATCAAGAAATGCAATTGTATTCTCACCACACCCAGCTGCATTAAAATGTTCAACAAAAGCAATAGAACTTATGCGTGAT
GCAGCAGTAGCAGCAGGAGCTCCTGCAAATGTAATTGGTGGTATTGTTACACCATCTATACAAGCTACAAATGAACTTAT
GAAAGCTAAAGAAGTTGCTATGATAATTGCAACTGGAGGCCCTGGAATGGTAAAGGCTGCATATAGTTCAGGAACACCTG
CAATAGGCGTTGGTGCTGGTAACTCTCCATCCTATATTGAAAGAACTGCTGATGTTCATCAATCAGTTAAAGATATAATA
GCTAGTAAGAGTTTTGACTATGGTACTATTTGTGCATCCGAGCAGTCTGTAATTGCAGAAGAATGCAACCATGATGAAAT
AGTAGCTGAATTTAAGAAACAAGGCGGATATTTCATGACAGCTGAAGAAACTGCAAAAGTTTGCAGCGTACTTTTTAAAC
CTGGTACACACAGCATGAGCGCTAAGTTTGTAGGAAGAGCTCCTCAGGTTATAGCAGAAGCTGCAGGTTTCACAGTTCCA
GAAGGAACAAAAGTATTAATAGGAGAACAAGGCGGAGTTGGTAATGGTTACCCTCTATCTTATGAGAAACTTACAACAGT
ACTTGCTTTCTATACAGTTAAAGATTGGCATGAAGCATGTGAGCTTAGTATAAGATTACTTCAAAATGGTCTTGGACATA
CAATGAACATTCATACAAATGATAGAGACTTAGTAATGAAGTTTGCTAAAAAACCAGCATCCCGTATCTTAGTTAATACT
GGTGGAAGCCAGGGAGGTACTGGTGCAAGCACAGGATTAGCACCTGCATTTACATTAGGTTGTGGTACATGGGGAGGAAG
CTCTGTTTCTGAAAATGTTACTCCATTACATTTAATCAATATAAAGAGAGTAGCATATGGTCTTAAAGATTGTACTACAT
TAGCTGCAGACGATACAACTTTCAATCATCCTGAACTTTGCGGAAGCAAAAATGACTTAGGATTCTGTGCTACAAGCCCT
GCAGAATTTGCAGCAAAGAGCAATTGTGATAGCACTGCTGCAGATACTACTGATAATGATAAACTTGCTAGACTCGTAAG
TGAATTAGTAGCTGCAATGAAGGGAGCTAACTAA

Protein sequence :
MENFDKDLRSIQEARDLARLGKIAADQIADYTEEQIDKILCNMVRVAEENAVCLGKMAAEETGFGKAEDKAYKNHMAATT
VYNYIKDMKTIGVIKEDKSEGVIEFAEPVGLLMGIVPSTNPTSTVIYKSIIAIKSRNAIVFSPHPAALKCSTKAIELMRD
AAVAAGAPANVIGGIVTPSIQATNELMKAKEVAMIIATGGPGMVKAAYSSGTPAIGVGAGNSPSYIERTADVHQSVKDII
ASKSFDYGTICASEQSVIAEECNHDEIVAEFKKQGGYFMTAEETAKVCSVLFKPGTHSMSAKFVGRAPQVIAEAAGFTVP
EGTKVLIGEQGGVGNGYPLSYEKLTTVLAFYTVKDWHEACELSIRLLQNGLGHTMNIHTNDRDLVMKFAKKPASRILVNT
GGSQGGTGASTGLAPAFTLGCGTWGGSSVSENVTPLHLINIKRVAYGLKDCTTLAADDTTFNHPELCGSKNDLGFCATSP
AEFAAKSNCDSTAADTTDNDKLARLVSELVAAMKGAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42076.1 hypothetical protein Not tested PAI II 536 Protein 5e-97 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c11960 YP_003779366.1 acetaldehyde dehydrogenase VFG1595 Protein 3e-97 50