Gene Information

Name : CLJU_c11980 (CLJU_c11980)
Accession : YP_003779368.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Virulence
Product : microcompartment protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 1297933 - 1298223 bp
Length : 291 bp
Strand : +
Note : -

DNA sequence : 
ATGAAATCTGATGCATTAGGAATGATTGAAACAAAGGGGTTAGTAGGTTCTATAGAGGCTGCAGATGCAATGGTTAAGGC
AGCTAACGTTAACTTAATAGGTAAAGAACATGTTGGCGGCGGTCTTGTAACAGTAATGGTAAGAGGAGATGTAGGAGCAG
TAAAGGCAGCTACTGATGCTGGTGCTGCAGCAGCACAACGTGTTGGAGAATTAGTTTCTGTTCATGTTATTCCTCGTCCA
CACGTTGAAGTTGAAACTATCCTTCCTAAAACTGGTTTAAAGGAAGACTAA

Protein sequence : 
MKSDALGMIETKGLVGSIEAADAMVKAANVNLIGKEHVGGGLVTVMVRGDVGAVKAATDAGAAAAQRVGELVSVHVIPRP
HVEVETILPKTGLKED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-16 68
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-16 63
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 4e-15 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c11980 YP_003779368.1 microcompartment protein VFG1596 Protein 1e-16 68
CLJU_c11980 YP_003779368.1 microcompartment protein VFG1597 Protein 2e-16 63
CLJU_c11980 YP_003779368.1 microcompartment protein VFG1598 Protein 2e-15 63