Gene Information

Name : CLJU_c39700 (CLJU_c39700)
Accession : YP_003782096.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Virulence
Product : microcompartment protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 4321186 - 4321482 bp
Length : 297 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATATGATGCATTAGGAATGATTGAAACAAAAGGTTTAGTAGGTTCAATTGAAGCTGCAGATGCAATGGTAAAGGC
AGCTAATGTTTATCTAATAGGAAAAGAACATGTTGGTGGCGGTCTTGTAACAGTAATGGTAAGAGGAGATGTAGGAGCTG
TAAAGGCAGCTACTGATGCTGGTGCTGCAGCAGCACAACGTGTTGGAGAATTAGTTTCTGTTCATGTTATTCCTCGTCCA
CACGTTGAAGTTGAAACTATCCTTCCTAAAACTAATTTAAAGGAAGATGAAAAGTAG

Protein sequence : 
MKYDALGMIETKGLVGSIEAADAMVKAANVYLIGKEHVGGGLVTVMVRGDVGAVKAATDAGAAAAQRVGELVSVHVIPRP
HVEVETILPKTNLKEDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-15 66
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 9e-15 64
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 8e-14 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c39700 YP_003782096.1 microcompartment protein VFG1596 Protein 2e-15 66
CLJU_c39700 YP_003782096.1 microcompartment protein VFG1597 Protein 4e-15 64
CLJU_c39700 YP_003782096.1 microcompartment protein VFG1598 Protein 3e-14 64