Gene Information

Name : CLJU_c39850 (CLJU_c39850)
Accession : YP_003782111.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Virulence
Product : microcompartment shellprotein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 4335293 - 4335595 bp
Length : 303 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCAAATATGTAGCTTTAGGTTTAGTAGAAACATTTGGTTTGGTTTTTGTTTTAGAGGCTGCAGATGCAATGTGTAA
AGCTGCAGATGTTGAATTAATTGGCTATGAAAATGTAGCTTCCGGTTATATTTCTGTATTGGTTGCCGGGGATGTAGGAG
CTTGCAAAGCAGCTGTAGAAGCTGGAGTAAAAGCTGTAAAAGATATGGGAACTGAAGTTTATAGTTCAGTTGTTATTGCA
AGTCCACATCCAGATCTTCAGAAAATCACCAAACGTTATACAATTGAAAATTTACTTCCTTAA

Protein sequence : 
MSKYVALGLVETFGLVFVLEAADAMCKAADVELIGYENVASGYISVLVAGDVGACKAAVEAGVKAVKDMGTEVYSSVVIA
SPHPDLQKITKRYTIENLLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 1e-14 61
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 6e-14 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c39850 YP_003782111.1 microcompartment shellprotein VFG1597 Protein 5e-15 61
CLJU_c39850 YP_003782111.1 microcompartment shellprotein VFG1596 Protein 2e-14 61
CLJU_c39850 YP_003782111.1 microcompartment shellprotein VFG1598 Protein 1e-13 57