Gene Information

Name : CLJU_c39860 (CLJU_c39860)
Accession : YP_003782112.1
Strain : Clostridium ljungdahlii ATCC 49587
Genome accession: NC_014328
Putative virulence/resistance : Virulence
Product : microcompartment shellprotein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 4335635 - 4335931 bp
Length : 297 bp
Strand : -
Note : -

DNA sequence : 
ATGAGGTATTATGGCGAAGAGGCATTAGGCCTTATTGAAACATTAGGGATGGTTCCTGCAATTGAAGCAGCAGACAAAAT
GCTGAAGGCTGCTGACGTTGAACTTATATCATATGAAAATATAGGTTCCACTCTTGTTACAATTATGGTAAAAGGTGATG
TTGCTGCTGTTAGAGCATCTGTGGAAGCAGGAGCTGCTGCTGCTGCAGCAATAGGAAAATTGACAGCACACAATGTTATG
CCAAGACCAATTAAAGGTGTTGGGGACATTGTTTCAGTACATGACATCGATGCATAA

Protein sequence : 
MRYYGEEALGLIETLGMVPAIEAADKMLKAADVELISYENIGSTLVTIMVKGDVAAVRASVEAGAAAAAAIGKLTAHNVM
PRPIKGVGDIVSVHDIDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-13 60
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-12 59
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 7e-12 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CLJU_c39860 YP_003782112.1 microcompartment shellprotein VFG1596 Protein 2e-13 60
CLJU_c39860 YP_003782112.1 microcompartment shellprotein VFG1597 Protein 2e-12 59
CLJU_c39860 YP_003782112.1 microcompartment shellprotein VFG1598 Protein 3e-12 57