Gene Information

Name : NIDE1090 (NIDE1090)
Accession : YP_003796776.1
Strain : Candidatus Nitrospira defluvii
Genome accession: NC_014355
Putative virulence/resistance : Resistance
Product : putative lipoprotein-releasing system protein LolD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 1061909 - 1062607 bp
Length : 699 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 10048040, 10783239, 11421269, 11844772, 11988180, 14729705, 9640644, 9872322, 9873074; Product type t : transporter

DNA sequence : 
ATGCAAGATCCCGCCAACATGCTGGTACAGGTGCAGAATCTTTCGAAAGCATATCGCCGCGGGCAGACGATTGTGTCGGC
GTTGCAGGACGTGACCCTCGGCGTGAAGGCGGGAGAGTTCTGTGCCTTCGTCGGGCCGAGCGGGTGCGGGAAGAGCACGC
TGCTGAATCTCATCGGTGGGCTCGATCGGCCCACCTCGGGAGCCATCGCCATTGAGAACCGGCCTGTGACCCATGCGAGC
GCCACCGAATGGACCCGCTTGAGGCGAGAGTTGATCGGAATTGTTTTTCAGGCCTTCCACCTTATTCCCGGCCTGACGGT
TGGGGAGAATGTCGCCTTGCCTTTGCTGCTGAGGGGGGAACGGGGGGCCGCGGTGGCCGAGCGGGTCAACGAAGTCTTGG
CGGCGGTGCGGATGGACAGGCGACGTTCGCACCGGCCGGGTGAGTTGTCGGGAGGGGAGCAGCAGCGCGTCGCGATTGCC
CGGGCGATCGTGCATCGACCACGACTTGTTCTGGCGGATGAACCGACCGGGAATCTCGATTCCAAGCAAGGGGCGGACAT
CGTCAGCCTGTTCCGTACGTTACCGCAACGGTTTGGTCACTCGGTCTTGCTGGTGACGCACAGTGAGAGCGCGGCCGACG
CAGCCGACTATGTGTGGCATATGCGGGACGGCCGATTGGTGAATTGTGTCCGGCACTAG

Protein sequence : 
MQDPANMLVQVQNLSKAYRRGQTIVSALQDVTLGVKAGEFCAFVGPSGCGKSTLLNLIGGLDRPTSGAIAIENRPVTHAS
ATEWTRLRRELIGIVFQAFHLIPGLTVGENVALPLLLRGERGAAVAERVNEVLAAVRMDRRRSHRPGELSGGEQQRVAIA
RAIVHRPRLVLADEPTGNLDSKQGADIVSLFRTLPQRFGHSVLLVTHSESAADAADYVWHMRDGRLVNCVRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NIDE1090 YP_003796776.1 putative lipoprotein-releasing system protein LolD NC_008702.1.4606598. Protein 9e-36 46
NIDE1090 YP_003796776.1 putative lipoprotein-releasing system protein LolD CP001581.1.gene798.p Protein 3e-45 43
NIDE1090 YP_003796776.1 putative lipoprotein-releasing system protein LolD NC_012469.1.7686878. Protein 3e-37 42