Gene Information

Name : gapA (NIDE1107)
Accession : YP_003796792.1
Strain : Candidatus Nitrospira defluvii
Genome accession: NC_014355
Putative virulence/resistance : Unknown
Product : glyceraldehyde-3-phosphate dehydrogenase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0057
EC number : 1.2.1.12
Position : 1077113 - 1078120 bp
Length : 1008 bp
Strand : -
Note : Evidence 2a : Function of homologous gene experimentally demonstrated in an other organism; PubMedId : 10799476, 10978154, 1862091, 2602126, 2656407, 2684782, 3586018, 8508805, 8636984; Product type e : enzyme

DNA sequence :
ATGACCACACGCATCGGCATCAATGGATTCGGACGCATCGGCCGCAACGTTCTTCGTGCTTCCCTGGGAGATCCCAGCCT
GGAATTTGTCGCCATCAATGACCTCACCGATGCGAAAACATTGGCCTATTTGCTCAAGTACGACTCGGTCCATGGCACCC
TCGACGCGTCCGTAGAGGCCAAAGACGACCAGCTCATTATTGATGGGAAGGCCATCAAGGTCTTAGCCGTCAGAGATCCG
AAGGAGCTTCCCTGGAAGGCCCTCGGCGTAGAGATCGTCGTGGAATCGACGGGACACTTTACCGACCGCGAAGGAGCGGG
AAAGCATCTCTCGGCCGGGGCGAAAACCGTGATCATTTCGGCGCCTGCCAAAGACCCCGATGCCACAGTGGTCCTCGGCG
TGAACGAACAAGTTTTCGATGTGAAGGCACACCATATCGTCTCCAACGCATCCTGTACCACCAACTGCCTGGCCCCGGTC
GCCAAAGTCTTGCTGGAAAACTTCGGCATCAAACACGGCGTCATGACGACGATTCATTCCTACACGAATGACCAGCAGTT
GCTCGATCTCCCCCACAAGGACCTCCGCCGTGCGCGGGCGGCCGGTATGTCGATGATCCCGACCAGCACCGGAGCGGCGA
AGGCGCTCCACCTGGTGATCCCGCAATTGAAGGGGAAATTGGACGGACTGGCCATCCGGGTCCCCACCCCCAATGTCTCC
CTGGTCGACCTCACAGTCGAAACCGAACAGGATTGCGATGTGGCAGGGGTGAATGCCGCATTCAAGAAAGCCGCCGAAGG
CCCCATGAAAAATGTATTGGCCTATTCGGATGCTCCGATCGTCTCGATCGATCTCAAAGACGATCCACACTCCGCGATCG
TCGATGCTCCGTTAACCGCGGTGATCGACAAGCGACTCGTCAAGGTCACCGCCTGGTACGACAACGAGTGGGGCTATTCC
TGCCGCGTGCGGGACCTGATCAAATACATCGTCGCCAAAGGGGCGTGA

Protein sequence :
MTTRIGINGFGRIGRNVLRASLGDPSLEFVAINDLTDAKTLAYLLKYDSVHGTLDASVEAKDDQLIIDGKAIKVLAVRDP
KELPWKALGVEIVVESTGHFTDREGAGKHLSAGAKTVIISAPAKDPDATVVLGVNEQVFDVKAHHIVSNASCTTNCLAPV
AKVLLENFGIKHGVMTTIHSYTNDQQLLDLPHKDLRRARAAGMSMIPTSTGAAKALHLVIPQLKGKLDGLAIRVPTPNVS
LVDLTVETEQDCDVAGVNAAFKKAAEGPMKNVLAYSDAPIVSIDLKDDPHSAIVDAPLTAVIDKRLVKVTAWYDNEWGYS
CRVRDLIKYIVAKGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
epd AAO17215.1 Epd Not tested tcd island Protein 4e-55 42