Gene Information

Name : ybbA (NIDE0665)
Accession : YP_003796361.1
Strain : Candidatus Nitrospira defluvii
Genome accession: NC_014355
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 637302 - 638000 bp
Length : 699 bp
Strand : +
Note : Evidence 2b : Function of strongly homologous gene; PubMedId : 11421269, 11544226, 11988180, 12832048, 1303751, 9640644, 9872322, 9873074; Product type t : transporter

DNA sequence : 
ATGAGCGACGCAGCCATGGTTGATCCGGTTGTCAGTCTCCACAACGTCACCAAGACCTATATCCGGGGCGGCACGGAAGT
GTCGGTTATTCGAGATTTGTCTTTCGTGATCCCCGCTGGGACCTTTCTCGCGATCATGGGGCCGTCAGGGTCGGGGAAAA
GCACGTTGTTGAACGTGATGGCCGGCATCGATCGGCCGACGAGCGGATCGGTGGTGGTGGCCGGAACCAGGCTGGAGCAA
TTGTCGGAGGGTGAGATGGCGCGATGGCGGGCACGCCACATCGGCTATGTCTTTCAAACCTACAATCTCATTCCGGTCCT
GACGGCGGCGGAGAATGTGGAATTGCCGCTGGCGCTGACGCATCTGACGAGACGCGAACGTGCCGACCATGTGAAGACCG
CGTTGCGCCTGGTCGGATTGGCCGATCGGATGGATCACTACCCGCGGCAGCTGTCCGGCGGGCAGGAACAGCGGGTCGGT
GTGGCGCGCGCGATCGTCAGCGACCCGACCATGATTCTGGCGGACGAGCCGACCGGCAATCTCGATCGCGAATCGGCCGA
CGATATTCTGACCCTGTTGGCTCGATTGAACCGGGAATTGGGCAAGACCATCGTGATGGTCACCCACGATCCTCGCGCTG
CCGAGCGCGCGCAGATGATCCGGCATCTGGAAAAGGGGCTTCTGGAGATGCCGCCGTGA

Protein sequence : 
MSDAAMVDPVVSLHNVTKTYIRGGTEVSVIRDLSFVIPAGTFLAIMGPSGSGKSTLLNVMAGIDRPTSGSVVVAGTRLEQ
LSEGEMARWRARHIGYVFQTYNLIPVLTAAENVELPLALTHLTRRERADHVKTALRLVGLADRMDHYPRQLSGGQEQRVG
VARAIVSDPTMILADEPTGNLDRESADDILTLLARLNRELGKTIVMVTHDPRAAERAQMIRHLEKGLLEMPP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-32 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_003796361.1 ABC transporter ATPase NC_008702.1.4606598. Protein 2e-40 47
ybbA YP_003796361.1 ABC transporter ATPase NC_012469.1.7686878. Protein 5e-42 45
ybbA YP_003796361.1 ABC transporter ATPase CP001581.1.gene798.p Protein 1e-42 41
ybbA YP_003796361.1 ABC transporter ATPase CP001581.1.gene598.p Protein 7e-40 41