Gene Information

Name : Spirs_R0021 (Spirs_R0021)
Accession : -
Strain : Spirochaeta smaragdinae DSM 11293
Genome accession: NC_014364
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1642104 - 1643633 bp
Length : 1530 bp
Strand : +
Note : -

DNA sequence :
AGAGTTTGATCCTGGCTCAGAACGAACGCTGGCGGCGCGTTTTAAGCATGCAAGTCGAGGGGTAGAAAGTCTTCGGACTT
TTGAGACCGGCGAACGGGTGAGTAACACGTAGATAATCTGTCTTGGGATGGGGGATAGCCCATGGAAACATGGGGTAATA
CCGCATAAGCTCTTTTACCCATAAGGGTGATAGAGGAAAGGCGCTTAGGCGTCGACCTAAGAGGAGTCTGCGGTCCATTA
TGTTAGTTGGTGGGGTAAAGGCCTACCAAGGCGGCGATGGATAGCCGGCCTGAGAGGGTGAACGGCCACACTGGGACTGA
GACACGGCCCAGACTCCTACGGGAGGCAGCAGCTAAGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCGACGCCGCGT
GAACGAAGAAGGCCGAAAGGTTGTAAAGTTCTTTTCTTGGAGAGGAATAAGCCTATCAGGAAATGGATGGGTGATGACGT
TAACCGAGGAAAAAGCCCCGGCTAATTACGTGCCAGCAGCCGCGGTAACACGTAAGGGGCGAGCGTTGTTCGGAATTATT
GGGCGTAAAGGGCGCGTAGGCGGCATGGCAAGTCAGGTGTGAAAGGCTCCAGCTCAACTGGAGAAACGCGCTTGAAACTG
TCGTGCTGGAGTCTAGGAGGGGAAGCTGGAATTCCTAGTGTAGGGGTGAAATCTGTAGATATCAGGAAGAACACCGGTGG
CGAAGGCGAGCTTCTGGCCATAGACTGACGCTGAGGCGCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTC
CACGCCGTAAACGATGTGCACTGGGTGTCGGCCCGTTGGGGTCGGTGCCGAAGCAAACGCGATAAGTGCACCGCCTGGGG
AGTATGCTCGCAAGGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGAT
ACGCGAGAAACCTTACCAGGGCTTGACATATGGTGGACGGTGGTAGAGATACCGCTTCCCTTCGGGGCCGCTATACAGGT
GCTGCATGGCTGTCGTCAGCTCGTGCTGTGAAGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTGCTATCTGTTGCC
ATCATTAAGTTGGGGACTCAGATGGAACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGGCCC
TTATGTCCTGGGCTACACACGTGCTACAATGAACGGTACAGAGCGCCGCGAGACCGCGAGGTCCAAGCAAATCGCAAAAA
GCCGTTCTCAGTACAGATTGGAGTCTGAAACCCGACTCCATGAAGGTGGAATCGCTAGTAATCGCGCATCAGCATGGCGC
GGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACCCGAGTTGGGGGTACCCGAAGTCGCTAGTCTAACC
GGTAACGGAGGACGGTGCCGAAGGTATGCCTAGTAAGGGGGGTGAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGC
TGGATCACCT

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-109 83.2
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-109 83.2
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-185 81.5
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-185 81.5
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-185 81
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-185 81