Gene Information

Name : Spirs_3892 (Spirs_3892)
Accession : YP_003805571.1
Strain : Spirochaeta smaragdinae DSM 11293
Genome accession: NC_014364
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4195359 - 4196042 bp
Length : 684 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: rmr:Rmar_2536 ABC transporter; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: ABC transporter; PFAM: ABC transporter

DNA sequence : 
ATGGGCGTAGTTGACACCATTGCGCTCTATAAAGATTACGAACTGAACGATTTGAAGATACATGCCCTCCGAGGTGTAAG
CCTAAGCTTTGAGGCTGGGGCCTTTGCCGCTGTTGCAGGCCCTTCCGGAAGCGGTAAGTCCACCTTCCTGCACCTCGTCG
GTTGTCTCGACACCCCCACGGCCGGCTCTCTTTCCGTCGATGAACGTGAGGTTGCCTCACTCTCCCGTAACCAATCGGCA
CTCTTGCGACGGCAAAAAATCGGGTTCATCTTCCAGGCCTATAATCTGATACCGGTTCTTTCCGCTCTTGAGAATGTTTC
TCTTCCGTTGGTACTGCTTGGAATAGAAAAGAAGGAGGCCCGGCAGCAGTCGCTTCGGGCTTTGGAAGAGGTCGGTCTGG
GAGGTATGGAACATCGTCGGCCTAAGGAGATGTCCGGCGGTCAGCAGCAACGGGTGGCGATTGCCCGTGCGCTGGTGAAA
AAGCCGTCTCTTATCCTCGCTGATGAACCCACCGCTAATCTCGATTCGACCACAGGCAGGGCTATCCTCGATCTTATGCT
TGCGTTGAATGAGAAAGAAGGAACGACTTTTATCTTTTCCACACACGATCCCATGGTAATGGAGTTTGCCCGTCGTTTGA
TAATGCTTCGTGACGGGATGGTTGAATCGGAGAGTCGACGATGA

Protein sequence : 
MGVVDTIALYKDYELNDLKIHALRGVSLSFEAGAFAAVAGPSGSGKSTFLHLVGCLDTPTAGSLSVDEREVASLSRNQSA
LLRRQKIGFIFQAYNLIPVLSALENVSLPLVLLGIEKKEARQQSLRALEEVGLGGMEHRRPKEMSGGQQQRVAIARALVK
KPSLILADEPTANLDSTTGRAILDLMLALNEKEGTTFIFSTHDPMVMEFARRLIMLRDGMVESESRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-30 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spirs_3892 YP_003805571.1 ABC transporter NC_008702.1.4606598. Protein 4e-43 48
Spirs_3892 YP_003805571.1 ABC transporter NC_012469.1.7686878. Protein 4e-45 46
Spirs_3892 YP_003805571.1 ABC transporter CP001581.1.gene598.p Protein 4e-38 43