Gene Information

Name : Deba_2110 (Deba_2110)
Accession : YP_003808069.1
Strain : Desulfarculus baarsii DSM 2075
Genome accession: NC_014365
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2334793 - 2335482 bp
Length : 690 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439:IPR015854; KEGG: gem:GM21_3422 ABC transporter related; PFAM: ABC transporter related; SMART: ATPase AAA; SPTR: C6E5C2 ABC transporter;

DNA sequence : 
TTGACAGAAGGCCAGGCATTAATTCATATAAGGAAGCTTTGCAAGAGCTATGTCCTGGCCGGGCAGAAGGTCGAGGTGCT
CAAGGGGCTCGACCTCAGCGTGCATGCCGGCCAGATGGTGGCCGTGCTGGGGGCCTCGGGCGTGGGCAAGTCCACGCTGT
TGCACATCACCGGGGCCTTGGATCGCCCCACGTCGGGGCAGTTGCTGGTGGCCGGGCGCGATCTGTTCAAGATGGACGAA
CCGGCCCTGGCCGCGTTCAGGAACGAACATATAGGCTTCGTGTTTCAGTTTCATCACCTTTTGCCCGAGTTTTCGGCGCT
CGAGAACGTCATGATGCCCGCCCTCATCGCCAGGACGCCAAAGGCCAAGGCCCAGGAAGCGGCCGAGGATCTTTTGGAGG
CCGTGGGGATGGGCCATCGCCGCCAGCATCGTCTGGCCGAGTTGTCCGGCGGCGAGCAACAGCGGGTGGCCATCGCCCGC
GCCCTGGTGCGTCAACCCCGGGTTCTGTTGGCCGACGAGCCCACGGGCAACCTGGACGAGCGCACCGGCCGACTTGTTTT
CGACCTGTTGCAAGGATTGAATGACCAGCGGGGTCTGACGACCCTGGTGGCTACCCACAATGAAAGGCTTGCCGCGGTCA
TGGACCGGCGGATCAGGTTGGCCGACGGCCTGGCCCATCCGGTGGACTAG

Protein sequence : 
MTEGQALIHIRKLCKSYVLAGQKVEVLKGLDLSVHAGQMVAVLGASGVGKSTLLHITGALDRPTSGQLLVAGRDLFKMDE
PALAAFRNEHIGFVFQFHHLLPEFSALENVMMPALIARTPKAKAQEAAEDLLEAVGMGHRRQHRLAELSGGEQQRVAIAR
ALVRQPRVLLADEPTGNLDERTGRLVFDLLQGLNDQRGLTTLVATHNERLAAVMDRRIRLADGLAHPVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deba_2110 YP_003808069.1 ABC transporter NC_012469.1.7686878. Protein 1e-38 45
Deba_2110 YP_003808069.1 ABC transporter NC_008702.1.4606598. Protein 2e-31 43
Deba_2110 YP_003808069.1 ABC transporter CP001581.1.gene798.p Protein 3e-38 41