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Name : hlyB (HDN1F_23680) Accession : YP_003811594.1 Strain : gamma proteobacterium HdN1 Genome accession: NC_014366 Putative virulence/resistance : Virulence Product : type I secretion system ATPase Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 2919739 - 2921913 bp Length : 2175 bp Strand : - Note : silverDB:HdN1F3149 DNA sequence : ATGGAACCCTCCCCGGTACCCAATATAAATACAGGGCTCGTTTGCCTCACCCTCATTGCACGCTTTCACCATTGTGCCGT CGATCCTGCGCATTTAGATCATCAATTCGGCCAATTCGGCAAGCATTTCGAGGATGTAGAGATCCTGCGTGCTGCAAAAC AGCTTAAGCTCAAGGCACGAGGATTCCACGCATCATGGGATGCGCTTATTCGAAGCGCATTACCGGCGATAGGCAGAAAG CGCGATGGCAGCTTTTTTATAATCGCAAAAGCCAGTGAAGATAGCGTTCTGGTTCAGTTTCCAGGTGCATCATCGCCCGC GACTCTAACAAAACAGGAATTACTCGAAATCTGGAGTGGCCATGTCATTCTGATTACCAAACGTATCTCCTGGATGGATC AGAACCGGAAATTTGATATTGCATGGTTCATTCCTGCGCTATTGAAGTACAAAAAGTATCTCGTTGATGTGGTGGTCGCA TCATTCTTCATCCAACTGTTCGCGCTGATCTCTCCTCTTTTCTTTCAGGTAATCGTTGACAAAGTATTAGTACATAGGGG GATGAGCACACTTGATGTTCTGGCTTTTGGCCTTTTGGTCATTTCCATATTCGATGTGCTTCTGAATGGCCTCAGAACCT ATATTTTCAGCCACACAACCAACCGAGTCGATGTGGCCCTCGGCGCAAATTTGTTTGGACATCTTGTACATTTGCCTATC TCCTATTATTTGGCGCGACAAGTCGGTAATACTGTTGCGCGCGTGAGGGAACTCGACACGATTCGAAACTTTATTACCAG TTCTTCTTTGACCTTGCTGATCGATCTGTTTTTTACGCTGGTTTTCTTCGCTGTTATGTACTACTACAGCCCGAAACTCA CCGCGATAGTGGCATTGTCGATACCCGTCTATGTTGCGCTTTCATTTGTTGTGACACCGATCCTTAAGAAACGGCTCGAC GAGAAGTTCAGTCGAGGAGCAGAAAATCAAGCGTTCTTAACTGAAGCGGTAACCAACATCGAAACAGTAAAAGCCATGGC TGTCGAACCGCAGATGCAGCGCAAATGGGAAGAACAGCTAGCTGGGTATGTCGCTGCTTCGTTTAAAGCGAATAATACGA ACGTGGTGGCAAGCCAGTTTGCCCAATTGACCAGCAAAATTGTAGCTGTTCTGCTTCTGTGGTTTGGTGCAACGGCTGTT ATTGACGGTGATCTTACGATTGGCCAGTTAATCGCCTTCAATATGATAGCGGGTCAAGTAAGTGCACCCATTCTGCGGCT TGTTCAGTTATGGCAGGACTTTCAACAGGTGGGCATCTCCATTGAAAGACTAGGAGATATTTTGAATACCCCGCGCGAAA ACGGTTCCAACAATCGAACCACACTACCAAGCATTGCGGGGCGAGTCACGTTCGACAATGTTGTTTTTCGTTACGCGTCA ACACAGCCCAATGTGCTTAACGGGATATCAATAGACGTTAGGCCAGGAGAAATAGTGGGTATTGTTGGCCAGTCAGGTTC TGGTAAAAGCACGCTAACAAAATTGATCCAGCGCCTATTTGTTCCAGAAAATGGGAGGATCTTGATTGACGGTATTGATG TTTCCCAGGTTGACCCTGCTTGGTTACGCCGCCAGGTAGGGGTGGTGCTTCAGGAAAGCAGATTGTTCAATCGCTCCGTT AAAGAAAACATCGCACTATGTGATCCAGGCATTCCCATTGAAAGAGTTATAGCCGCTGCAAAACACGCAGGGGCGCATGA GTTTATTGCTCAAATGCCTGAAGGGTATGACACCGTTATTGGAGAGCAAGGTGCGTCACTTAGTGGCGGGCAGCGTCAGC GCATCGCAATTGCGAGAGCATTGATCACAAATCCTCGGGTGCTTATTTTTGACGAGGCCACCAGTGCGCTGGATTATGAA TCGGAACGAATAATCCAGGACAACATGAAGTCAATCTGTCAAAACCGCACGGTATTCATCATTGCCCATCGGCTGAGTAC AGTTCGAAACGCGGACAGAATAATAGTATTGGATAAAGGGCAGATTGTGGAAGTGGGGAGCCACGATCAACTCATAACGA GAAAAGGATATTATTCCAATCTGCACGATTATCAATCCGCAACTCCACCCTTAAGGGCAGTGAATGTTGTCAGCAAGGCA GGAGGTTCGGAGTGA Protein sequence : MEPSPVPNINTGLVCLTLIARFHHCAVDPAHLDHQFGQFGKHFEDVEILRAAKQLKLKARGFHASWDALIRSALPAIGRK RDGSFFIIAKASEDSVLVQFPGASSPATLTKQELLEIWSGHVILITKRISWMDQNRKFDIAWFIPALLKYKKYLVDVVVA SFFIQLFALISPLFFQVIVDKVLVHRGMSTLDVLAFGLLVISIFDVLLNGLRTYIFSHTTNRVDVALGANLFGHLVHLPI SYYLARQVGNTVARVRELDTIRNFITSSSLTLLIDLFFTLVFFAVMYYYSPKLTAIVALSIPVYVALSFVVTPILKKRLD EKFSRGAENQAFLTEAVTNIETVKAMAVEPQMQRKWEEQLAGYVAASFKANNTNVVASQFAQLTSKIVAVLLLWFGATAV IDGDLTIGQLIAFNMIAGQVSAPILRLVQLWQDFQQVGISIERLGDILNTPRENGSNNRTTLPSIAGRVTFDNVVFRYAS TQPNVLNGISIDVRPGEIVGIVGQSGSGKSTLTKLIQRLFVPENGRILIDGIDVSQVDPAWLRRQVGVVLQESRLFNRSV KENIALCDPGIPIERVIAAAKHAGAHEFIAQMPEGYDTVIGEQGASLSGGQRQRIAIARALITNPRVLIFDEATSALDYE SERIIQDNMKSICQNRTVFIIAHRLSTVRNADRIIVLDKGQIVEVGSHDQLITRKGYYSNLHDYQSATPPLRAVNVVSKA GGSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 2e-178 | 56 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 2e-178 | 56 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 2e-178 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hlyB | YP_003811594.1 | type I secretion system ATPase | VFG1557 | Protein | 1e-178 | 56 |
| hlyB | YP_003811594.1 | type I secretion system ATPase | VFG1501 | Protein | 1e-178 | 56 |
| hlyB | YP_003811594.1 | type I secretion system ATPase | VFG0907 | Protein | 7e-179 | 56 |
| hlyB | YP_003811594.1 | type I secretion system ATPase | VFG0841 | Protein | 3e-170 | 55 |
| hlyB | YP_003811594.1 | type I secretion system ATPase | VFG1269 | Protein | 6e-178 | 52 |
