Gene Information

Name : 16SrRNA (HDN1F_r07)
Accession : -
Strain : gamma proteobacterium HdN1
Genome accession: NC_014366
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1090464 - 1091986 bp
Length : 1523 bp
Strand : +
Note : -

DNA sequence : 
AGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAGCGGTAACAGGCCTTCGGGTGC
TGACGAGCGGCGGACGGGTGAGGATAGCGCAGGAATCTGCCTTGTAGTGGGGGATAGTCCAGAGAAATTTGGGGTAATAC
CGCATAATCCCTGAGGGGTAAAGTGGGGGACCGTAAGGCCTCACGCTACAAGAGGAGCCTGCGTCGGATTAGCTAGTTGG
TGGGGTAAGGGCCTACCAAGGCGACGATCCGTAGCTGGTCTGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCC
AGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCGTGTGTGAAGAA
GGCCTTCGGGTTGTAAAGCACTTTAAGCGGGGAGGAACGGGTATTCGTGAATATCGGATACTTTTGACGTTACCCGCAGA
ATAAGCACCGGCAAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAG
CGCACGTAGGCGGTCATGTACGTGGGATGTGAAATCCCCGGGCTTAACCTGGGACTTGCATACCAGACTGCATGGCTAGA
GTATGAGAGAGGGTGGTGGAATTTCCGGTGTAGCGGTGAAATGCGTAGAGATCGGAAGGAACATCAGTGGCGAAGGCGGC
CACCTGGCTTAATACTGACGCTGAGGAGCGAAAGCGTGGGGATCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAA
ACGATGAGAACTAGCCGTTGGATTCCTTGAGGATTTAGTGGCGCAGCTAACGCGATAAGTTCTCCGCCTGGGGAGTACGG
CCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGACGCAACGCGAA
AAACCTTACCAGGCCTTGACATCCATGGGATCTTGCAGAGATGCGGGAGTGCCTTCGGGAACCATGAGACAGGTGCTGCA
TGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGTAACGAGCGCAACCCTTATCCTTAGTTGCCAGCACG
TAAAGGTGGGAACTCTAAGGAGACTGCCGGTGACAAACCGGAGGAAGGCGGGGATGACGTCAAGTCATCATGGCCCTTAC
GGCCTGGGCTACACACGTACTACAATGGTCGGTACAGAGGGCTGCGAGACCGCGAGGTTTAGCCAATCCCTTAAAGCCGG
TCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCAGATCAGCATGCTGCGGTGA
ATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTCTGTTGCACCAGAAGCCGGTAGTCTAACCGAAAG
GGGGGCGCCGTCCACGGTGTGGCCGATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATCA
CCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-143 87.9
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-143 87.9
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-143 87.8
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-143 87.8
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-143 87.8
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-143 87.8