Gene Information

Name : HMPREF0659_A6163 (HMPREF0659_A6163)
Accession : YP_003814226.1
Strain :
Genome accession: NC_014370
Putative virulence/resistance : Resistance
Product : putative lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1465322 - 1466029 bp
Length : 708 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGATAGATATTAAGAACATAACTAAAAGCTTTGGCTCGCTTCAAGTGTTGAAGGGTATTGACCTTCGTATTGAAAAGGG
AGAGGTTGTCAGTATTGTTGGTCCATCTGGAGCTGGTAAAACCACCTTGTTACAGATACTTGGAACGCTGGACAAGCCAG
ATAGTGGCTCTGTTGTTGTGGATGGTATTGACGTGGGCAGCCTGTCAGCCGGTAAGTTGAGTGATTTCCGCAACCAGCAC
TTAGGCTTTGTCTTCCAATTTCATCAGCTTCTTCCTGAGTTTACAGCTCTTGAGAATATTATGATTCCTGCTTATATTGC
TGGCAAGAAGAATAAGGATGCACGTCAGCGTGCCGAAGAACTGTTGGAATTTATGGGCTTGAGCGATCGTGCTAATCATA
AGCCTAACGAACTTTCTGGTGGTGAGAAGCAGCGTGTGGCAGTAGCTCGTGCGTTGGTGAACAACCCTGCTGTCATCCTT
GCTGATGAGCCTTCGGGTAGTTTGGATTCGAAAAACAAGCAGGAGTTACATCAGCTCTTCTTCGATCTCCGTGATAAGTT
CGGTCAGACTTTCGTTATCGTTACACACGATGAGGGTCTTGCACAGATAACAGATAGAACGATACATCTTAAAGATGGCT
TGATAGAAAGCCTCCCCCAGCCCCTCCGAAAGGAGGGGAGTGCTACTATCAAGATAGAGAATGAGTAG

Protein sequence : 
MIDIKNITKSFGSLQVLKGIDLRIEKGEVVSIVGPSGAGKTTLLQILGTLDKPDSGSVVVDGIDVGSLSAGKLSDFRNQH
LGFVFQFHQLLPEFTALENIMIPAYIAGKKNKDARQRAEELLEFMGLSDRANHKPNELSGGEKQRVAVARALVNNPAVIL
ADEPSGSLDSKNKQELHQLFFDLRDKFGQTFVIVTHDEGLAQITDRTIHLKDGLIESLPQPLRKEGSATIKIENE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-21 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0659_A6163 YP_003814226.1 putative lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 6e-39 47
HMPREF0659_A6163 YP_003814226.1 putative lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 9e-30 42
HMPREF0659_A6163 YP_003814226.1 putative lipoprotein releasing system, ATP-binding protein CP001581.1.gene798.p Protein 4e-36 42