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Name : clpB (HMPREF0659_A5569) Accession : YP_003813676.1 Strain : Genome accession: NC_014370 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 756202 - 758790 bp Length : 2589 bp Strand : - Note : identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346 DNA sequence : ATGACATTTGAGAAATTTACAATTAAAGCACAAGAAGCTGTTCAGAGTGCGATAAACATTGCACAGCGAAATGGACAGCA GACCATTGAGCCAGTACATATATTAGCTGGTGTAATGGATAAAGGAAAGGATGTAATAAATTACGTCTTCCAGAAAATTG GCGTCAACGCACAAGCTGTGGAGACTACCATTCAGAATGAGATGAGCCACTTACCAAAAGTATCTGGTGGTGAGCCTTAC CTCTCTTCTGAAACCAATCAGGTGATGCAGCGTACTATAGAGACCTCCCAGAAGATGGGTGACGAATTCGTTAGTATCGA ACCGATGCTGCTCGCCCTACTTGCGGTAAACTCAACTGCAAGCCGCATTTTGAAAGATGCGGGTTGTACTGAGAAGGAAA TGACAGCTGCTATCAATGATCTTAGACAAGGTCAGAAGGTACAGTCACAAAGTGGTGATGAGAACTATCAGTCATTACAG AAATATGCACGCAACCTTATCGAGGATGCACGTGCAGGAAAACTCGACCCAGTGATTGGTCGTGATGAGGAGATTCGTAG AGTATTACAGATTCTATCTCGTCGTACAAAAAATAACCCTATTCTCATTGGTGAGCCAGGTACTGGTAAGACAGCTATCG TTGAGGGGTTAGCAGAGAGAATCGTTCGTGGTGATGTGCCAGAAAACTTAAAGGACAAGCAACTCTATTCACTGGATATG GGTGCGATGTTGGCTGGTGCTAAATATAAAGGTGAGTTCGAGGAGCGTCTTAAAAGCGTTGTTAAGGAAGTGATGCAGGC TGATGGTAACATCATTCTCTTCATTGACGAGATTCACACATTGGTTGGTGCAGGTGGTGGCGAAGGTGCCATGGATGCAG CAAATATCCTTAAACCAGCCTTAGCACGTGGTGAGTTGAGAGCTATCGGTGCAACAACACTCAATGAATATCAGAAGTAT TTTGAGAAAGATAAGGCGCTTGAACGTCGTTTCCAAACCGTATTAGTAGATGAACCAGACGAGTTGGATGCTATCTCTAT CCTTCGTGGATTGAAGGAACGTTATGAGAATCATCACAAGGTACGTATCCAAGATGATGCTTGTATCGCAGCTGTTAAGC TTTCTGAGCGGTATATTTCAGACCGTTTCTTGCCAGATAAGGCTATCGACTTGATGGATGAGGCTGCTGCAAAACTGCGT ATGGAACGTGACTCTGTACCAGAGGAGTTGGATGAAATCAGTCGTAGATTGAAGCAACTTGAGATTGAGCGTGAGGCTAT TAAACGCGAGAACGACACAGAGAAGATTGCACAACTCGACAAGGAAATCGCTGAACTCAAAGAGCAGGAACATGGATTCC GTGCAAAGTGGGAGGGCGAACGTGGACTGGTGAATAAGATTCAGCAGGACAAGCAAGAGATTGAGCAGCTCAAGTATGAG GCTGATCGTGCCGAGCGTGAGGGTAATTACGAGCGTGTTGCCGAGATTAGATACTCACGACTAAAGCAATTAGAAGACGA TATCAAGAACATCCAACAGCAGTTGCAAGCGACACAAGATGGGCAAGCAATGGTGCGCGAGGAGGTTACAGCAGATGATA TCGCTGAGGTTGTGAGCCGTTGGACAGGTATTCCTGTCACACGAATGTTACAGAGTGAGAAGGATAAACTGCTCCACTTA GAGGATGAATTGCACAAGCGTGTCATCGGACAAGATGAGGCTATCACAGCTGTAGCAGATGCGGTTCGTCGTTCACGTGC AGGATTGCAAGATCCAAAGAAGCCTATTGCTTCCTTCATCTTCTTAGGTACAACGGGTACTGGTAAGACCGAGTTGGCAA AGGCATTGGCTGATTATCTCTTCAATGACGAGTCTATGATGACCCGAATTGATATGAGTGAGTATCAAGAGAAGTTCAGT GTAACTCGACTCATCGGTGCGCCTCCAGGATATGTAGGCTATGATGAGGGCGGTCAGTTGACTGAGGCTGTACGCCGCAA GCCTTACTCTGTCGTACTCTTTGATGAGATTGAGAAGGCACATCCAGACGTATTCAACATTCTTTTGCAGGTGTTGGACG ATGGTCATCTGACAGATAATAAGGGACGAACAGTGAACTTCAAGAATACGATTATCATCATGACGTCTAATCTTGGTTCA CAATACATCCAGCAACAGTTTGAATATCTTAACGATACTAACCGTGAGGAGGTAATCGACAAGGCAAAAGTTGCGGTAAT GGATATGTTGAAGAAGACTATTCGTCCTGAGTTCCTCAACCGTATCGATGAGACTATCATGTTCTTGCCATTGACAAAAG AGCAGATTGGTGATGTCGTTCGTTTGCAGCTCGAAAGAGTTAAGGATATGTTAGAGCCACAGGGTATTGAACTTCAGTGG ACCGACCCAGCCATCAATTATCTTTCAGATGTTGGCTACGACCCAGAGTTCGGTGCACGTCCTGTCAAGCGAGCTATCCA ACGTTACGTATTGAACGACCTCAGTAAGTCATTGCTTGCAGGTACAGTCAACCGTGACAAGCCTGTCATCATCGACAGCT TCGGCGAAGGCTTAGTATTTAGAAACTAA Protein sequence : MTFEKFTIKAQEAVQSAINIAQRNGQQTIEPVHILAGVMDKGKDVINYVFQKIGVNAQAVETTIQNEMSHLPKVSGGEPY LSSETNQVMQRTIETSQKMGDEFVSIEPMLLALLAVNSTASRILKDAGCTEKEMTAAINDLRQGQKVQSQSGDENYQSLQ KYARNLIEDARAGKLDPVIGRDEEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLAERIVRGDVPENLKDKQLYSLDM GAMLAGAKYKGEFEERLKSVVKEVMQADGNIILFIDEIHTLVGAGGGEGAMDAANILKPALARGELRAIGATTLNEYQKY FEKDKALERRFQTVLVDEPDELDAISILRGLKERYENHHKVRIQDDACIAAVKLSERYISDRFLPDKAIDLMDEAAAKLR MERDSVPEELDEISRRLKQLEIEREAIKRENDTEKIAQLDKEIAELKEQEHGFRAKWEGERGLVNKIQQDKQEIEQLKYE ADRAEREGNYERVAEIRYSRLKQLEDDIKNIQQQLQATQDGQAMVREEVTADDIAEVVSRWTGIPVTRMLQSEKDKLLHL EDELHKRVIGQDEAITAVADAVRRSRAGLQDPKKPIASFIFLGTTGTGKTELAKALADYLFNDESMMTRIDMSEYQEKFS VTRLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGHLTDNKGRTVNFKNTIIIMTSNLGS QYIQQQFEYLNDTNREEVIDKAKVAVMDMLKKTIRPEFLNRIDETIMFLPLTKEQIGDVVRLQLERVKDMLEPQGIELQW TDPAINYLSDVGYDPEFGARPVKRAIQRYVLNDLSKSLLAGTVNRDKPVIIDSFGEGLVFRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 8e-157 | 44 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-98 | 41 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-98 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003813676.1 | ATP-dependent chaperone protein ClpB | VFG2076 | Protein | 7e-119 | 44 |
| clpB | YP_003813676.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 4e-102 | 43 |
