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Name : Bresu_1595 (Bresu_1595) Accession : YP_003818529.1 Strain : Brevundimonas subvibrioides ATCC 15264 Genome accession: NC_014375 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 1563474 - 1567589 bp Length : 4116 bp Strand : + Note : KEGG: pzu:PHZ_c1218 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase subunit beta; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 7; RNA polymerase s DNA sequence : ATGACTGACGTCCTGAACGGTCTCACCATCAATGGTCAGATCGCATCGGCCACGACCTTCACCGGCAAGAAGCGCATCCG CAAATCGTTCGGCCGCATCCCCGAGGCGGTGCAGATGCCGAACCTGATCGAGGTTCAGCGCGAATCCTACGAGCAGTTCC TGCAGCGCGAGGTCCGTCCGGGCGTCCGCAAGGAACAGGGCATCGAGGCCGTGTTCAAGTCGGTCTTCCCGATCAAGGAC TTCAACGAACGCGCCGTGCTGGAATACGTGTCCTACGAATTCGAGGACCCCAAGTACGACGTCGAGGAATGCATCCAGCG CGACATGACCTATGCCGCGCCGCTGAAGGTCAAGCTGCGCCTGATCGTGTTCGAGGCGGACGAGGAAACGGGCGCGCGCT CGGTCAAGGACATCAAGGAGCAGGACGTCTACATGGGGGACATCCCCCTGATGACGGACAAGGGGACCTTCATCGTCAAC GGCACCGAGCGGGTGATCGTCTCGCAGATGCACCGGTCGCCGGGCGTCTTCTTCGACCACGACAAGGGCAAGACCCACTC CTCGGGCAAGCTGCTGTTCGCCGCGCGGGTGATCCCGTACCGCGGCTCGTGGCTGGACTTCGAGTTCGACGCCAAGGACA TCGTGTTCGTCCGCATCGACCGTCGCCGCAAGCTGCCCGCCTCGACCTTCCTGATGGCCCTGGGCATGGACGGCGAAGAG ATCCTGCGCACCTTCTACGAGACCGTGCCGTACGAGAAGCGCGGCGACGGCTGGGTCACCCCCTACAAGGCCGAACGCTG GAGGGGCGTGAAGCCCGAGTTCGATCTGGTCGATGCCGACACCGGCGAGATCGTCGCCCAGGCCGGCCAGAAGATCAGCG CTCGCGCCGCCAAGAAGCTGGGTGACACCACCAAGTCGCTGTCGCTCGCGGCCGACGCCCTGGTGACCCGCTACCTGGCC GCCGACGCCGTCAACTACGAGACCGGCGAGATCTATGCCGAAGCCGGCGACGAGCTGGACGCGCCGACCATCGAACTGCT GGAAGAGCGCGGCTTCACCACCATCGACGTGCTGGACATCGACCACGTCACGGTCGGCGCCTACATGCGCAACACCCTGC GGGTCGACAAGTCGACGGGCCGCGAGGACGCGCTGTTCGACATCTATCGCGTGATGCGCCCCGGCGAGCCCCCGACCCCG GAAGCCGCCGAAGCCATGTTCAACTCGCTGTTCTTCGACGGCGAGCGTTACGACCTGTCGGCCGTCGGCCGGGTCAAGAT GAACATGCGTCTGGAAACGCCGGAAGTGTCCGACGAAATCCGCGTCCTGCAGAAGGACGACGTGCTGAAGGTGCTGCAGA TTCTCGTCGGCCTGAAGGACGGCCGCGGCGAGATCGACGACATCGACAACCTGGGCAACCGCCGGGTCCGTTCGGTCGGC GAGCTGCTGGAAAACCAGTACCGCGTCGGTCTGCTGCGCATGGAGCGCGCCATCAAGGAGCGCATGTCGTCGGTCGATAT CGACACGGTGATGCCGCACGACCTGATCAACGCGAAGCCGGCCGCGGCCTCGGTGCGTGAATTCTTCGGCTCGTCGCAGC TGTCGCAGTTCATGGACCAGACGAACCCGCTGTCCGAGATCACCCACAAGCGGCGCCTGTCGGCGCTTGGACCGGGCGGT CTGACGCGCGAGCGCGCGGGCTTCGAAGTCCGCGACGTGCACCCGACCCACTACGGCCGCATCTGCCCGATCGAAACGCC GGAAGGCCCGAACATCGGCCTGATCAACTCGCTGGCGACCCACGCCCGGGTCAACAAATACGGCTTCATCGAGAGCCCGT ACCGGCGCGTGAAGGACGGCAAGGCCCTAGACGAGGTGGTCTACATCTCGGCCATGGAGGAGTCGAAATACACGATCGCC CAGGCGAACATCGCCCTCAAGGACGGCATGATCGTCGACGAACTGGTCCCGGGCCGGATCAACGGCGACTCGCAGCTGCT GATCCGCGCCGACGTCGACATGATGGACGTGTCGCCGAAACAGGTCGTCTCGGTCGCCGCGGCCCTGATCCCCTTCCTGG AAAACGACGACGCCAACCGGGCCCTGATGGGCGCGAACATGCAGCGTCAGGCCGTGCCTCTGGTGCAGTCGGACGCGCCG CTGGTCGGCACCGGCATGGAAGCGGTCGTCGCCCGTGACTCTGGGGCCGTCGTGGTCGCCCGTCGTGACGGCGTGGTCGA ACAGATCGACGGCACGCGGATCGTGGTCCGCGCCACCGGCGACCTGGACGCCGGCCGTTCGGGCGTCGACATCTACCGCC TGTCGAAGTTCCAGCGCTCCAACCAGTCGACCTGCATCAACCAGCGCCCGATCGTGCGCGTGGGCGATGAAGTGAAGACC GGCGACGTGATCGCCGACGGCCCGTCGACGGACCTGGGCGAACTGGCCCTGGGCCGGAACGCGCTCGTCGCCTTCATGCC GTGGAACGGCTACAACTTCGAGGACTCGATCCTGATCTCCGAGCGCATCGTGCGCGACGACGTCTTCACCTCGATCCACC TCGAGGAGTTCGAGGTCATGGCCCGCGATACGAAGCTTGGGCCTGAGGAAATCACCCGCGACATCCCCAACGTCGGCGAG GAAGCCCTGCGCAACCTCGACGAGGCGGGCATCGTGGCCATCGGCGCCGAGGTCCAGCCGGGCGACATCCTGTGCGGCAA GGTCACGCCCAAGGGCGAAAGCCCGATGACCCCCGAAGAGAAGCTGCTGCGGGCCATCTTCGGCGAGAAGGCTTCGGACG TCCGCGACACCTCGCTGCGCCTGCCGCCCGGCGTGGCCGGCACGATCGTCGACGTGCGCGTGTTCAACCGCCACGGCGTC GACAAGGACGAACGCGCCATGTCGATCGAACGCGACGAGATCGAACGCCTGGGCAAGGACCGCGACGACGAACTCGCGAT CCTGGAGCGCAACACCTACGGCCGCCTGAAGCCCCTGCTGCTGGGCAAGAACGCCGTCTCGGGTCCCAAGGGCCTGGGTC GCGGTGAAGTGACGGACGCCAAGCTGGGCGAGCTGTCGCGCGGCCTGTGGTGGCAGATCGCCCTCGACGACGAGAAGGCG ATGGGCGAGCTGGAGCAGATGAAGAAGTCGTTCGAGGACGCCCGCAAGGCGCTCGACCGTCGCTTCGAGGACAAGGTCGA GAAGCTGCAGCGCGGCGACGAACTGCCCCCCGGCGTGATGAAGATGGTCAAGGTGTTCGTGGCCGTGAAGCGCAAGCTTC AGCCCGGGGACAAGATGGCCGGTCGTCACGGCAACAAGGGCGTCATCTCCAAGATCCTGCCGATCGAGGACATGCCGCAC CTGGAAGACGGGACCTCGGTCGACGTCGTTCTGAACCCGCTGGGCGTGCCTTCGCGCATGAACATCGGCCAGATCTTCGA AACCCACCTGGGTTGGGCCTCGGCCGGACTGGGCAAGCAGATCCAGGGTCTGCTGGAAGCCTGGCAGGGCGGTGGCCAGA AGCAGGCGCTGATCGATCACCTGACCGGCATCTACGGCGAGGACACCCCTCTGCCGCAGGACGAGCACGAGCTGGTCGAG CTGGCGCAGAACCTTTCCAAGGGCGTTCCGTTCGCCACCCCGGTGTTCGACGGCGCGCACATCTCGGACATCGAGGACCT GCTGGAGAAGGCCGGTCTGGAGCGTTCGGGTCAGTCGATCGTCTATGACGGCACGACCGGCGAGCAGTTCAAGCGCCCGG TCACGGTCGGCTACATCTACATGCTGAAGCTGCACCACCTGGTCGACGACAAGATCCACGCCCGTTCGATCGGACCGTAC TCGCTCGTCACCCAGCAACCGCTGGGCGGCAAGGCGCAGTTCGGCGGACAGCGCTTCGGGGAGATGGAGGTCTGGGCTCT GGAAGCCTACGGCGCCGCCTACACCCTGCAGGAGATGCTGACCGTGAAGTCCGACGACGTGGCCGGACGGACGAAGGTCT ACGAGGCCATCGTGCGCGGCGACGACAGCTTCGAGGCGGGCATTCCCGAGAGCTTCAACGTTCTCATCAAGGAAATGCGC TCGCTGGGTCTGAACGTGGAGCTGGAGAACAGCTGA Protein sequence : MTDVLNGLTINGQIASATTFTGKKRIRKSFGRIPEAVQMPNLIEVQRESYEQFLQREVRPGVRKEQGIEAVFKSVFPIKD FNERAVLEYVSYEFEDPKYDVEECIQRDMTYAAPLKVKLRLIVFEADEETGARSVKDIKEQDVYMGDIPLMTDKGTFIVN GTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARVIPYRGSWLDFEFDAKDIVFVRIDRRRKLPASTFLMALGMDGEE ILRTFYETVPYEKRGDGWVTPYKAERWRGVKPEFDLVDADTGEIVAQAGQKISARAAKKLGDTTKSLSLAADALVTRYLA ADAVNYETGEIYAEAGDELDAPTIELLEERGFTTIDVLDIDHVTVGAYMRNTLRVDKSTGREDALFDIYRVMRPGEPPTP EAAEAMFNSLFFDGERYDLSAVGRVKMNMRLETPEVSDEIRVLQKDDVLKVLQILVGLKDGRGEIDDIDNLGNRRVRSVG ELLENQYRVGLLRMERAIKERMSSVDIDTVMPHDLINAKPAAASVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGG LTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATHARVNKYGFIESPYRRVKDGKALDEVVYISAMEESKYTIA QANIALKDGMIVDELVPGRINGDSQLLIRADVDMMDVSPKQVVSVAAALIPFLENDDANRALMGANMQRQAVPLVQSDAP LVGTGMEAVVARDSGAVVVARRDGVVEQIDGTRIVVRATGDLDAGRSGVDIYRLSKFQRSNQSTCINQRPIVRVGDEVKT GDVIADGPSTDLGELALGRNALVAFMPWNGYNFEDSILISERIVRDDVFTSIHLEEFEVMARDTKLGPEEITRDIPNVGE EALRNLDEAGIVAIGAEVQPGDILCGKVTPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTIVDVRVFNRHGV DKDERAMSIERDEIERLGKDRDDELAILERNTYGRLKPLLLGKNAVSGPKGLGRGEVTDAKLGELSRGLWWQIALDDEKA MGELEQMKKSFEDARKALDRRFEDKVEKLQRGDELPPGVMKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKILPIEDMPH LEDGTSVDVVLNPLGVPSRMNIGQIFETHLGWASAGLGKQIQGLLEAWQGGGQKQALIDHLTGIYGEDTPLPQDEHELVE LAQNLSKGVPFATPVFDGAHISDIEDLLEKAGLERSGQSIVYDGTTGEQFKRPVTVGYIYMLKLHHLVDDKIHARSIGPY SLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDSFEAGIPESFNVLIKEMR SLGLNVELENS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 58 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 60 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 59 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 59 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 59 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 59 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 59 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 59 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 59 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 58 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 58 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 58 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 58 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 58 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 58 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 58 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 58 |
| Bresu_1595 | YP_003818529.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 57 |
