Gene Information

Name : Closa_4005 (Closa_4005)
Accession : YP_003824139.1
Strain : Clostridium saccharolyticum WM1
Genome accession: NC_014376
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 4344959 - 4345243 bp
Length : 285 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: cpy:Cphy_1430 microcompartments protein

DNA sequence : 
ATGAAATACGATGCATTAGGAATGATTGAAACAAAAGGTCTGATTGGATCCATCGAAGCAGCAGATGCTATGGTAAAGGC
AGCAAACGTTACCCTCATCGGTAAGGAGTTTGTCGGCGGCGGTCTTGTTACTGTTATGGTAAGAGGTGACGTAGGAGCTG
TTAAGGCAGCTACCGATGCGGGTGCAGCAGCAGCTCAGCGTGTAGGCGAGCTGGTATCTGTGCATGTAATTCCACGTCCC
CATGCAGAAGTTGAAACAATTCTTCCGGGAACAAGAGAAGCGTAA

Protein sequence : 
MKYDALGMIETKGLIGSIEAADAMVKAANVTLIGKEFVGGGLVTVMVRGDVGAVKAATDAGAAAAQRVGELVSVHVIPRP
HAEVETILPGTREA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 5e-15 67
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-15 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 5e-14 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Closa_4005 YP_003824139.1 microcompartments protein VFG1597 Protein 2e-15 67
Closa_4005 YP_003824139.1 microcompartments protein VFG1596 Protein 1e-15 67
Closa_4005 YP_003824139.1 microcompartments protein VFG1598 Protein 2e-14 63