Gene Information

Name : Closa_4006 (Closa_4006)
Accession : YP_003824140.1
Strain : Clostridium saccharolyticum WM1
Genome accession: NC_014376
Putative virulence/resistance : Virulence
Product : propanediol utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4869
EC number : -
Position : 4345286 - 4345921 bp
Length : 636 bp
Strand : -
Note : PFAM: Propanediol utilization protein; KEGG: cpy:Cphy_1429 propanediol utilization protein

DNA sequence : 
ATGGATCAGTATGAAGCGGTAATCAAACTCTTAATGGAAGCCGTAAAAGCGGAATCAGGAACCCATGAGTTCCGCATACC
CGTCGGCGTTTCCAACCGCCATGTGCATCTGTCCCAGGAAGACTTGGATACCCTTTTCGGCCAGGGTTACCAATTGACCA
AAATGAAGGAACTATCCCAGCCGGGACAGTATGCATGCAAGGAAACAGTCACCGTATGCGGCCCAAAGGGAGCCATTGAA
AAGGTCCGTATATTAGGTCCGGTCAGAAAACAGACGCAGGTCGAGGTTCTGGCGGCAGACTGTTTTAAGCTTGGAACAAA
TTCTCAGCCAAGGATGTCCGGTGAATTAACCGGTACACCGGGGATTACCCTGGTAGGGCCCAAGGGCTCTGTTCAGACCA
GGGAAGGCTTAATCATCGCACAGAGACACATTCACATGACACCTCAGGATGCCTTAAATTTCGGTGTCCATGACGGACAG
ACGGTAAGCATTCAGACAGAAGGGATCCGGGGCGGTATCTTTCATCATACGGCAATCCGCGTAACCGATACATCCAGTCT
GGAATGCCATCTGGATACGGAAGAAGCAAATGCCATGGGACTTGGCAGTTCATCATGGGTTACCATTGTAAAATAA

Protein sequence : 
MDQYEAVIKLLMEAVKAESGTHEFRIPVGVSNRHVHLSQEDLDTLFGQGYQLTKMKELSQPGQYACKETVTVCGPKGAIE
KVRILGPVRKQTQVEVLAADCFKLGTNSQPRMSGELTGTPGITLVGPKGSVQTREGLIIAQRHIHMTPQDALNFGVHDGQ
TVSIQTEGIRGGIFHHTAIRVTDTSSLECHLDTEEANAMGLGSSSWVTIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42070.1 hypothetical protein Not tested PAI II 536 Protein 1e-41 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Closa_4006 YP_003824140.1 propanediol utilization protein VFG1589 Protein 5e-42 54