Gene Information

Name : Closa_4020 (Closa_4020)
Accession : YP_003824154.1
Strain : Clostridium saccharolyticum WM1
Genome accession: NC_014376
Putative virulence/resistance : Virulence
Product : microcompartments protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 4358143 - 4358451 bp
Length : 309 bp
Strand : -
Note : PFAM: microcompartments protein; KEGG: cpy:Cphy_1415 microcompartments protein

DNA sequence : 
ATGGAAAGATATGAAGCCATAGGTGCGATAGAAACATTTGGTCTGGTATTTGTTCTCGAAGCGGCTGATGCAATGTGCAA
AGCGGCAGATGTGGAACTGGTGGGTTATGAAAATGTAGCTTCCGGTTATATTTCTGTTCTGGTAAGGGGGGACGTAGGAG
CCTGCAAGACGGCAGTGGAAGCCGGAATCAAGGCAGTAAAGGATATGGGAACGGAAGTTTACAGCTCCGTTGTCATTCCA
AGACCTCATCCCCATCTTGAAAAAATCATCAGACGCTATGCCTTAATCACTGCTCCTGTACAGGAATAG

Protein sequence : 
MERYEAIGAIETFGLVFVLEAADAMCKAADVELVGYENVASGYISVLVRGDVGACKTAVEAGIKAVKDMGTEVYSSVVIP
RPHPHLEKIIRRYALITAPVQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-17 58
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 7e-19 55
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 3e-18 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Closa_4020 YP_003824154.1 microcompartments protein VFG1596 Protein 4e-18 58
Closa_4020 YP_003824154.1 microcompartments protein VFG1597 Protein 3e-19 55
Closa_4020 YP_003824154.1 microcompartments protein VFG1598 Protein 1e-18 52